Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(987)
  Primates
(0)
  Rodents
(490)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(196)
  Bacteria
(227)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(2,852)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(1,682)
  Tiling Array
(0)
  cDNA Array
(255)
  Oligo Array
(501)
  Bead Array
(12)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(368)
  Other
(0)
  All
(2,852)
 
  brain
(101)
  blood
(367)
  connective
(96)
  reproductive
(566)
  muscular
(0)
  digestive
(0)
  liver
(67)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(185)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(54)
  unclassified
(707)
  all
(2,852)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1008139 EFG1_input1 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:EFG1_input title:EFG1_input1 description:Sample 1
2 GSM1008140 EFG1_ip1 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:EFG1_IP title:EFG1_ip1 description:Sample 2
3 GSM1008141 EFG1_input2 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:EFG1_input title:EFG1_input2 description:Sample 3
4 GSM1008142 EFG1_ip2 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:EFG1_IP title:EFG1_ip2 description:Sample 4
5 GSM1008143 EFG1_input3 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:EFG1_input title:EFG1_input3 description:Sample 5
6 GSM1008144 EFG1_ip3 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:EFG1_IP title:EFG1_ip3 description:Sample 6
7 GSM1008145 WT_1_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:wild type_concentric title:WT_1_reads description:Wildtype Sample 1 processed_data_file: cuffdiff_WT_vs_EFG1smooth.txt processed_data_file: cuffdiff_WT_vs_EFG1concentric.txt
8 GSM1008146 WT_2_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:wild type_concentric title:WT_2_reads description:Wildtype Sample 2 processed_data_file: cuffdiff_WT_vs_EFG1smooth.txt processed_data_file: cuffdiff_WT_vs_EFG1concentric.txt
9 GSM1008147 WT_3_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:wild type_concentric title:WT_3_reads description:Wildtype Sample 3 processed_data_file: cuffdiff_WT_vs_EFG1smooth.txt processed_data_file: cuffdiff_WT_vs_EFG1concentric.txt
10 GSM1008148 EFG1c_1_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:efg1 mutant_concentric title:EFG1c_1_reads description:EFG1 concentric mutant Sample 1 processed_data_file: cuffdiff_WT_vs_EFG1smooth.txt
11 GSM1008149 EFG1c_2_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:efg1 mutant_concentric title:EFG1c_2_reads description:EFG1 concentric mutant Sample 2 processed_data_file: cuffdiff_WT_vs_EFG1smooth.txt
12 GSM1008150 EFG1c_3_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:efg1 mutant_concentric title:EFG1c_3_reads description:EFG1 concentric mutant Sample 3 processed_data_file: cuffdiff_WT_vs_EFG1smooth.txt
13 GSM1008151 EFG1s_1_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:efg1 mutant_smooth title:EFG1s_1_reads description:EFG1 smooth mutant Sample 1 processed_data_file: cuffdiff_WT_vs_EFG1concentric.txt
14 GSM1008152 EFG1s_2_reads 0 University Colege Dublin Conway Institute 2012-09-21 [HT Sequencing] Illumina Genome Analyzer IIx (Candida parapsilosis) (GPL16091) SRA Candida parapsilosis
Candida parapsilosis
unclassified source_name:efg1 mutant_smooth title:EFG1s_2_reads description:EFG1 smooth mutant Sample 2 processed_data_file: cuffdiff_WT_vs_EFG1concentric.txt
15 GSM1009202 BAM-1 0 Teagasc 2012-09-25 [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) SRA Bos taurus
Bos taurus
lung Lung lavage
16 GSM1009203 BAM-2 0 Teagasc 2012-09-25 [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) SRA Bos taurus
Bos taurus
lung Lung lavage
17 GSM1009204 BAM-3 0 Teagasc 2012-09-25 [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) SRA Bos taurus
Bos taurus
lung Lung lavage
18 GSM1009205 BAM-4 0 Teagasc 2012-09-25 [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) SRA Bos taurus
Bos taurus
lung Lung lavage
19 GSM1009206 BAM-5 0 Teagasc 2012-09-25 [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) SRA Bos taurus
Bos taurus
lung Lung lavage
20 GSM1009207 BAM-6 0 Teagasc 2012-09-25 [HT Sequencing] Illumina HiSeq 2000 (Bos taurus) (GPL15749) SRA Bos taurus
Bos taurus
lung Lung lavage
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