Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(63,220)		   blood
(169,267)		   connective
(49,492)		   reproductive
(38,618)		   muscular
(24,498)		   digestive
(31,399)		   liver
(51,405)		   lung
(30,850)		   urinary
(18,692)		   endo/exo-crine
(55,952)		   embryo
(18,082)		   adult aerial structure
(12,032)		   young aerial structure
(8,350)		   root
(4,764)		   meristem/growing tissue
(2,248)		   flower/sexual organ
(3,045)		   seed/fruit/grain
(3,128)		   pooled
(52,306)		   unclassified
(261,596)		   all
(898,944)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM738733 hyl1-2-dcl1-20_flower_8week 28,114,835 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 other flower/sexual organ flowers and flower buds, hyl1-2/dcl1-20
2 GSM738734 hyl1-2-dcl1-21_flower_8week 24,264,574 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 other flower/sexual organ flowers and flower buds, hyl1-2/dcl1-21
3 GSM738732 hyl1-2_flower_8week 19,648,148 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 other flower/sexual organ flowers and flower buds, hyl1-2
4 GSM738730 hyl1-2-dcl1-21_rosetteleaf_5week 19,060,497 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 leaf rosette leaves, hyl1-2/dcl1-21
5 GSM822758 Testes, P14 Miwi +/+ [MR09] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, P14 Miwi +/+
6 GSM822759 Testes, P20 Miwi +/+ [MR10] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, P20 Miwi +/+
7 GSM822760 Testes, Adult Miwi +/+ [MR11] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi +/+
8 GSM822761 Testes, Adult Miwi +/ADH [MR19] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi +/ADH
9 GSM822762 Testes, Adult Miwi -/ADH [MR25] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi -/ADH
10 GSM822763 Testes, Adult Miwi -/ADH [MR70] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi -/ADH
11 GSM822764 Testes, Adult Miwi -/ADH [MR71] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi -/ADH
12 GSM822765 Global 5' RACE +/- [MR97] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 unclassified source_name:Global 5' RACE +/- title:Global 5' RACE +/- [MR97] description:Adult Global 5'-RACE read_length: 105
13 GSM822766 Global 5' RACE -/ADH [MR99] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 unclassified source_name:Global 5' RACE -/ADH title:Global 5' RACE -/ADH [MR99] description:Adult Global 5'-RACE read_length: 105
14 GSM822767 Testes, Adult Miwi +/- [MR66] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi +/-
15 GSM822768 Testes, Adult Miwi +/ADH [MR67] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi +/ADH
16 GSM822769 Testes, Adult Miwi -/ADH [MR68] 17,578,027 EMBL Grenoble Outstation 2011-10-26 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 testis Testes, Adult Miwi -/ADH
17 GSM434596 Rice degradome 15,454,006 Oklahoma State University 2009-07-29 [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) SRA Oryza sativa
Oryza sativa		 young aerial structure seedlings
18 GSM252783 DNAse treated CD4+ T-cells on Solexa 14,814,587 National Cancer Institute 2007-12-21 [HT Sequencing] NCI Human Solexa Platform 14814K (GPL6314) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ T-cells, DNAse Treated
19 GSM738731 wild-type_flower_8week 13,160,378 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 other flower/sexual organ flowers and flower buds, wild-type
20 GSM738728 hyl1-2_rosetteleaf_5week 13,039,508 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 leaf rosette leaves, hyl1-2
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