Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,100)		   Primates
(0)		   Rodents
(968)		   Mammals
(51)		   Vertebrates
(107)		   Invertebrates
(254)		   Plants
(402)		   Bacteria
(343)		   Viruses
(0)		   Phages
(0)		   Unclassified
(46)		   All
(8,303)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(14)		   GeneChip
(4,366)		   Tiling Array
(101)		   cDNA Array
(1,280)		   Oligo Array
(1,468)		   Bead Array
(515)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(444)		   HT-Seq
(114)		   Other
(0)		   All
(8,303)		  
  brain
(293)		   blood
(1,479)		   connective
(338)		   reproductive
(205)		   muscular
(67)		   digestive
(384)		   liver
(511)		   lung
(29)		   urinary
(64)		   endo/exo-crine
(1,853)		   embryo
(455)		   adult aerial structure
(76)		   young aerial structure
(45)		   root
(29)		   meristem/growing tissue
(26)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(243)		   unclassified
(2,206)		   all
(8,303)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM815136 genomic DNA of HCT116 WT cells (r1) 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 colon Colon
2 GSM815137 genomic DNA of HCT116 WT cells (r2) 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 colon Colon
3 GSM815138 genomic DNA of HCT116 WT cells (r3) 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 colon Colon
4 GSM815139 genomic DNA of HCT116 DKO cells (r1) 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 colon Colon
5 GSM815140 genomic DNA of HCT116 DKO cells (r2) 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 colon Colon
6 GSM815141 genomic DNA of HCT116 DKO cells (r3) 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 colon Colon
7 GSM815142 genomic DNA of normal sample N1 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
8 GSM815143 genomic DNA of normal sample N2 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
9 GSM815144 genomic DNA of normal sample N3 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
10 GSM815145 genomic DNA of normal sample N4 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
11 GSM815146 genomic DNA of normal sample N5 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
12 GSM815147 genomic DNA of normal sample N6 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
13 GSM815148 genomic DNA of normal sample N7 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
14 GSM815149 genomic DNA of normal sample N8 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
15 GSM815150 genomic DNA of tumor sample BC1 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
16 GSM815151 genomic DNA of tumor sample BC2 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
17 GSM815152 genomic DNA of tumor sample BC3 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
18 GSM815153 genomic DNA of tumor sample BC4 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
19 GSM815154 genomic DNA of tumor sample BC5 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
20 GSM815155 genomic DNA of tumor sample BC6 485,577 Université Libre de Bruxelles 2011-10-12 [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) genomic Homo sapiens
Homo sapiens		 breast Breast
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