Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(987)
  Primates
(0)
  Rodents
(490)
  Mammals
(703)
  Vertebrates
(207)
  Invertebrates
(0)
  Plants
(196)
  Bacteria
(227)
  Viruses
(0)
  Phages
(0)
  Unclassified
(42)
  All
(2,852)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(1,682)
  Tiling Array
(0)
  cDNA Array
(255)
  Oligo Array
(501)
  Bead Array
(12)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(30)
  HT-Seq
(368)
  Other
(3)
  All
(2,852)
 
  brain
(101)
  blood
(367)
  connective
(96)
  reproductive
(566)
  muscular
(98)
  digestive
(104)
  liver
(67)
  lung
(18)
  urinary
(471)
  endo/exo-crine
(185)
  embryo
(14)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(4)
  seed/fruit/grain
(0)
  pooled
(54)
  unclassified
(707)
  all
(2,852)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM531779 muscle_pre-training_rep1 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
2 GSM531780 muscle_pre-training_rep2 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
3 GSM531781 muscle_pre-training_rep3 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
4 GSM531782 muscle_post-training_rep1 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
5 GSM531783 muscle_post-training_rep2 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
6 GSM531784 muscle_post-training_rep3 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
7 GSM531785 muscle_pre-training_rep4 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
8 GSM531786 muscle_pre-training_rep5 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
9 GSM531787 muscle_pre-training_rep6 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
10 GSM531788 muscle_pre-training_rep7 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
11 GSM531789 muscle_post-training_rep4 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
12 GSM531790 muscle_post-training_rep5 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
13 GSM531791 muscle_post-training_rep6 2,692,046 University College Dublin 2010-04-08 [HT Sequencing] Illumina Genome Analyzer II (Equus caballus) (GPL10300) SRA Equus caballus
Equus caballus
muscle gluteus medius muscle
14 GSM570257 Bsub_AH024_LPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
15 GSM570258 Bsub_AH024_LPDM_T3_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
16 GSM570259 Bsub_AH024_LPDM_exp_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
17 GSM570260 Bsub_168_HPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep1 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
18 GSM570261 Bsub_168_HPDM_exp_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep2 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
19 GSM570262 Bsub_168_LPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep1 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
20 GSM570263 Bsub_AH024_LPDM_T3_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
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