Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(391,468)		   Tiling Array
(22,222)		   cDNA Array
(104,397)		   Oligo Array
(247,270)		   Bead Array
(112,023)		   Protein Array
(5)		   Antibody
(1,160)		   RT-PCR
(4,486)		   HT-Seq
(39,106)		   Other
(7,515)		   All
(931,947)		  
  brain
(65,657)		   blood
(177,040)		   connective
(52,031)		   reproductive
(39,694)		   muscular
(25,023)		   digestive
(32,693)		   liver
(52,978)		   lung
(32,616)		   urinary
(19,280)		   endo/exo-crine
(57,776)		   embryo
(19,180)		   adult aerial structure
(12,240)		   young aerial structure
(8,419)		   root
(4,868)		   meristem/growing tissue
(2,307)		   flower/sexual organ
(3,159)		   seed/fruit/grain
(3,165)		   pooled
(53,094)		   unclassified
(270,727)		   all
(931,947)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1161280 DE 0 corpogen 2013-06-12 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium tuberculosis H37Rv) (GPL17280) SRA Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis H37Rv		 unclassified source_name:Culture in Dubos: exponential phase title:DE
2 GSM1161281 DS 0 corpogen 2013-06-12 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium tuberculosis H37Rv) (GPL17280) SRA Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis H37Rv		 unclassified source_name:Culture in Dubos: Stationary phase title:DS
3 GSM1161282 FE 0 corpogen 2013-06-12 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium tuberculosis H37Rv) (GPL17280) SRA Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis H37Rv		 unclassified source_name:Culture in Long Fatty Acids: exponential phase title:FE
4 GSM1161283 FS 0 corpogen 2013-06-12 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium tuberculosis H37Rv) (GPL17280) SRA Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis H37Rv		 unclassified source_name:Culture in Long Fatty Acids: Stationary phase title:FS
5 GSM1161419 MmES_Input_chromatin 0 Friedrich Miescher Institute for Biomedical Research 2013-06-12 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 embryo embryonic stem cells
6 GSM1156657 H3ac ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
7 GSM1156658 H3K27me3 ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
8 GSM1156659 H3ac H3K27me3 input control 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
9 GSM1156660 PolII ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
10 GSM1156661 PolII input control 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
11 GSM1156662 H3K4me2 ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
12 GSM1156663 H3K4me3 ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
13 GSM1156664 H3K4me2 H3K4me3 input control 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
14 GSM1156665 CTCF ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
15 GSM1156666 CTCF input control 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
16 GSM1156667 Rad21 ChIP-seq 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
17 GSM1156668 Rad21 input control 0 TSRI 2013-06-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 lymphnode Rag1 -/- pro-B cells
18 GSM1155488 RNA_HVH_sample1 47,305 University of Washington 2013-06-07 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Homo sapiens
Homo sapiens		 unclassified source_name:RNA_HVH_cardiovascular_disease title:RNA_HVH_sample1 description:Sample1
19 GSM1155489 RNA_HVH_sample2 47,305 University of Washington 2013-06-07 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Homo sapiens
Homo sapiens		 unclassified source_name:RNA_HVH_cardiovascular_disease title:RNA_HVH_sample2 description:Sample2
20 GSM1155490 RNA_HVH_sample3 47,305 University of Washington 2013-06-07 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Homo sapiens
Homo sapiens		 unclassified source_name:RNA_HVH_cardiovascular_disease title:RNA_HVH_sample3 description:Sample3
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