Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

All
(898,944)

SAGE NlaIII
(1,683)

SAGE RsaI
(3)

SAGE Sau3A
(54)

MPSS
(439)

GeneChip
(377,145)

Tiling Array
(21,846)

cDNA Array
(103,476)

Oligo Array
(239,584)

All
(898,944)

connective
(49,492)

reproductive
(38,618)

endo/exo-crine
(55,952)

embryo
(18,082)

adult aerial structure
(12,032)

young aerial structure
(8,350)

root
(4,764)

meristem/growing tissue
(2,248)

flower/sexual organ
(3,045)

seed/fruit/grain
(3,128)

pooled
(52,306)

unclassified
(261,596)

all
(898,944)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM631720	tumor	1,813,441	ZMF	2010-11-30	[GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801)	genomic	Homo sapiens	bone	Chordoma (TU) 14417.birdseed-v2.chp Hybridized to SNP 6.0
2	GSM631722	chordoma cell line p5	1,813,441	ZMF	2010-11-30	[GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801)	genomic	Homo sapiens	bone	chordoma cell line p5
3	GSM631723	chordoma cell line p13	1,813,441	ZMF	2010-11-30	[GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801)	genomic	Homo sapiens	bone	chordoma cell line p13
4	GSM684748	peritumoral HCC, bone metastasis, patient 1	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 1
5	GSM684749	intratumoral HCC, bone metastasis, patient 1	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 1
6	GSM684750	peritumoral HCC, bone metastasis, patient 2	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 2
7	GSM684751	intratumoral HCC, bone metastasis, patient 2	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 2
8	GSM684752	peritumoral HCC, bone metastasis, patient 3	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 3
9	GSM684753	intratumoral HCC, bone metastasis, patient 3	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 3
10	GSM684754	peritumoral HCC, bone metastasis, patient 4	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 4
11	GSM684755	intratumoral HCC, bone metastasis, patient 4	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 4
12	GSM684756	peritumoral HCC, bone metastasis, patient 5	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 5
13	GSM684757	intratumoral HCC, bone metastasis, patient 5	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 5
14	GSM684758	peritumoral HCC, bone metastasis, patient 6	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 6
15	GSM684759	intratumoral HCC, bone metastasis, patient 6	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 6
16	GSM684760	peritumoral HCC, bone metastasis, patient 7	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 7
17	GSM684761	intratumoral HCC, bone metastasis, patient 7	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 7
18	GSM684762	peritumoral HCC, bone metastasis, patient 8	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 8
19	GSM684763	intratumoral HCC, bone metastasis, patient 8	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	intratumoral HCC, bone metastasis, patient 8
20	GSM684764	peritumoral HCC, bone metastasis, patient 9	502	Zhongshan Hospital, Fudan University	2011-03-02	[Bead Array] DASL Human Cancer Panel by Gene (GPL5858)	RNA	Homo sapiens	bone	peritumoral HCC, bone metastasis, patient 9

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