Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(63,220)		   blood
(169,267)		   connective
(49,492)		   reproductive
(38,618)		   muscular
(24,498)		   digestive
(31,399)		   liver
(51,405)		   lung
(30,850)		   urinary
(18,692)		   endo/exo-crine
(55,952)		   embryo
(18,082)		   adult aerial structure
(12,032)		   young aerial structure
(8,350)		   root
(4,764)		   meristem/growing tissue
(2,248)		   flower/sexual organ
(3,045)		   seed/fruit/grain
(3,128)		   pooled
(52,306)		   unclassified
(261,596)		   all
(898,944)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM2095 MDA-MB-435_CL5011__BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool MDA-MB-435_CL5011__BREAST
2 GSM2096 MDA-N_CL5012__BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool MDA-N_CL5012__BREAST
3 GSM2098 T-47D__CL5014__BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool T-47D__CL5014__BREAST
4 GSM2111 MCF7_CL5001__BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool MCF7_CL5001__BREAST
5 GSM2113 HS_578T_CL5006__BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool HS_578T_CL5006__BREAST
6 GSM2121 BT-549_CL5013_BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool BT-549_CL5013_BREAST
7 GSM2124 MDA-MB-231_CL5005__BREAST 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference_Pool MDA-MB-231_CL5005__BREAST
8 GSM2137 MCF7A-repro 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast MCF7A-repro
9 GSM2149 Breast Tumor 16 X NCI reference 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Breast Tumor 16 X NCI reference
10 GSM2150 Normal Breast 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast Reference Pool Normal Breast
11 GSM2153 MCF7D-repro 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens		 breast MCF7D-repro
12 GSM291004 MCF7-J=7-set1-Cy5 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set1-Cy5 REF-Cy3
13 GSM291005 MCF7-J=7-set4-Cy3_REP-2 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set4-Cy3_REP-2 REF-Cy5
14 GSM291006 MCF7-J=7-set4-Cy5_REP-2 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set4-Cy5_REP-2 REF-Cy3
15 GSM291007 MCF7-J=7-set4-Cy5 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set4-Cy5 REF-Cy3
16 GSM291008 MCF7-J=7-set3-Cy5 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set3-Cy5 REF-Cy3
17 GSM291009 MCF7-J=7-set3-Cy3 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set3-Cy3 REF-Cy5
18 GSM291010 MCF7-J=7-set2-Cy5 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set2-Cy5 REF-Cy3
19 GSM291011 MCF7-J=7-set1-Cy3 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set1-Cy3 REF-Cy5
20 GSM291012 MCF7-J=7-set2-Cy3 23,232 INSERM, UMR U-674, Université Paris Descartes 2008-05-24 [cDNA Array] 11K_VJF-ARRAY (GPL3282) RNA Homo sapiens
Homo sapiens		 breast MCF7-J=7-set2-Cy3 REF-Cy5
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