Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,283)		   Primates
(80)		   Rodents
(6,896)		   Mammals
(298)		   Vertebrates
(469)		   Invertebrates
(517)		   Plants
(5,385)		   Bacteria
(1,328)		   Viruses
(9)		   Phages
(0)		   Unclassified
(100)		   All
(31,365)		  
  SAGE NlaIII
(28)		   SAGE RsaI
(3)		   SAGE Sau3A
(0)		   MPSS
(79)		   GeneChip
(13,710)		   Tiling Array
(988)		   cDNA Array
(2,586)		   Oligo Array
(13,249)		   Bead Array
(523)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(24)		   HT-Seq
(160)		   Other
(15)		   All
(31,365)		  
  brain
(2,396)		   blood
(3,718)		   connective
(1,227)		   reproductive
(1,401)		   muscular
(340)		   digestive
(1,971)		   liver
(2,840)		   lung
(1,478)		   urinary
(419)		   endo/exo-crine
(1,090)		   embryo
(971)		   adult aerial structure
(1,248)		   young aerial structure
(418)		   root
(391)		   meristem/growing tissue
(349)		   flower/sexual organ
(345)		   seed/fruit/grain
(169)		   pooled
(775)		   unclassified
(9,819)		   all
(31,365)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1019029 Flw, biological rep1 57,381 RIKEN 2012-10-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Flower in rice at the heading stage
2 GSM1019030 Flw, biological rep2 57,381 RIKEN 2012-10-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Flower in rice at the heading stage
3 GSM1019031 Flw, biological rep3 57,381 RIKEN 2012-10-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Flower in rice at the heading stage
4 GSM1019032 PBr, biological rep1 57,381 RIKEN 2012-10-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle branch in rice at the heading stage
5 GSM1019033 PBr, biological rep2 57,381 RIKEN 2012-10-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle branch in rice at the heading stage
6 GSM1019034 PBr, biological rep3 57,381 RIKEN 2012-10-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle branch in rice at the heading stage
7 GSM970819 PedicelProx_rep1 43,370 National Food Research Institute 2012-07-19 [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) RNA Solanum lycopersicum
Solanum lycopersicum		 other flower/sexual organ Proximal region of flower pedicel at anthesis
8 GSM970820 PedicelProx_rep2 43,370 National Food Research Institute 2012-07-19 [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) RNA Solanum lycopersicum
Solanum lycopersicum		 other flower/sexual organ Proximal region of flower pedicel at anthesis
9 GSM970821 PedicelProx_rep3 43,370 National Food Research Institute 2012-07-19 [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) RNA Solanum lycopersicum
Solanum lycopersicum		 other flower/sexual organ Proximal region of flower pedicel at anthesis
10 GSM970825 PedicelDis_rep1 43,370 National Food Research Institute 2012-07-19 [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) RNA Solanum lycopersicum
Solanum lycopersicum		 other flower/sexual organ Distal region of flower pedicel at anthesis
11 GSM970826 PedicelDis_rep2 43,370 National Food Research Institute 2012-07-19 [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) RNA Solanum lycopersicum
Solanum lycopersicum		 other flower/sexual organ Distal region of flower pedicel at anthesis
12 GSM970827 PedicelDis_rep3 43,370 National Food Research Institute 2012-07-19 [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) RNA Solanum lycopersicum
Solanum lycopersicum		 other flower/sexual organ Distal region of flower pedicel at anthesis
13 GSM968261 Inflorescence_1.0-1.5 mm_rep1 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 1.0-1.5 mm inflorescence, replicate 1
14 GSM968263 Inflorescence_1.0-1.5 mm_rep2 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 1.0-1.5 mm inflorescence, replicate 2
15 GSM968265 Inflorescence_1.5-2.0 mm_rep1 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 1.5-2.0 mm inflorescence, replicate 1
16 GSM968267 Inflorescence_1.5-2.0 mm_rep2 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 1.5-2.0 mm inflorescence, replicate 2
17 GSM968269 Inflorescence_2.0-2.5 mm_rep1 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 2.0-2.5 mm inflorescence, replicate 1
18 GSM968271 Inflorescence_2.0-2.5 mm_rep2 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 2.0-2.5 mm inflorescence, replicate 2
19 GSM968274 Inflorescence_2.5-3.0 mm_rep1 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 2.5-3.0 mm inflorescence, replicate 1
20 GSM968276 Inflorescence_2.5-3.0 mm_rep2 45,151 National Institute of Agrobiological Sciences 2012-07-17 [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 other flower/sexual organ 2.5-3.0 mm inflorescence, replicate 2
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