Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

All
(898,944)

SAGE NlaIII
(1,683)

SAGE RsaI
(3)

SAGE Sau3A
(54)

MPSS
(439)

GeneChip
(377,145)

Tiling Array
(21,846)

cDNA Array
(103,476)

Oligo Array
(239,584)

All
(898,944)

reproductive
(38,618)

endo/exo-crine
(55,952)

embryo
(18,082)

adult aerial structure
(12,032)

young aerial structure
(8,350)

root
(4,764)

meristem/growing tissue
(2,248)

flower/sexual organ
(3,045)

seed/fruit/grain
(3,128)

pooled
(52,306)

unclassified
(261,596)

all
(898,944)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM630938	POLA wild lines_N1	57,381	Yunnan Agricultural University	2010-11-29	[GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025)	RNA	Oryza sativa Japonica Group	other flower/sexual organ	Gene expression data from panicles of POLA wild lines at early to late meiotic stage
2	GSM630939	pola mutant_M1	57,381	Yunnan Agricultural University	2010-11-29	[GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025)	RNA	Oryza sativa Japonica Group	other flower/sexual organ	Gene expression data from panicles of pola mutant at early to late meiotic stage
3	GSM630940	POLA wild lines_N2	57,381	Yunnan Agricultural University	2010-11-29	[GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025)	RNA	Oryza sativa Japonica Group	other flower/sexual organ	Gene expression data from panicles of POLA wild lines at ten to fifteen days after pollination stage for ripening stage
4	GSM630941	pola RNAi lines_M2	57,381	Yunnan Agricultural University	2010-11-29	[GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025)	RNA	Oryza sativa Japonica Group	other flower/sexual organ	Gene expression data from panicles of pola wild lines at ten to fifteen days after pollination stage for ripening stage
5	GSM618277	RNA-seq petal	6,606,127	Yellow Sea Fisheries Research Institute (YSFRI), Chinese Academy of Fishery Sciences, Qingdao, 266071, China	2010-11-05	[HT Sequencing] Illumina Genome Analyzer (Carthamus tinctorius) (GPL11168)	SRA	Carthamus tinctorius	other flower/sexual organ	petal
6	GSM254078	Medicago_Flower	380,344	Yale University	2008-01-02	[Oligo Array] Yale University MCDB Medicago truncatula NimbleGen 390K Oligo Array (GPL6335)	RNA	Medicago truncatula	other flower/sexual organ	Medicago flower
7	GSM254085	Soybean_Flower	366,572	Yale University	2008-01-02	[Oligo Array] Yale University MCDB Glycine max NimbleGen 390K Oligo Array (GPL6337)	RNA	Glycine max	other flower/sexual organ	Soybean flower
8	GSM151360	Panicle D1	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle D1 Panicle without treatment as control sample
9	GSM151361	Panicle D2	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle D2 Panicle without treatment as control sample
10	GSM151362	Panicle D3	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle D3 Panicle without treatment as control sample
11	GSM151363	Panicle D5	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle D5 Panicle without treatment as control sample
12	GSM151364	Panicle S1	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle S1 Panicle without treatment as control sample
13	GSM151365	Panicle S2	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle S2 Panicle without treatment as control sample
14	GSM151366	Panicle S3	60,727	Yale University	2006-12-14	[Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829)	RNA	Oryza sativa	other flower/sexual organ	Panicle S3 Panicle without treatment as control sample
15	GSM297437	indica_VS_japonica_slideA	30,000	Yale University	2008-06-09	[MIXTURE] LIMA_SlideA (GPL1773)	RNA	Oryza sativa	other flower/sexual organ	comparing the expression pattern of heading-stage panicle in six rice lineages.
16	GSM297438	indica_VS_javanica_A	30,000	Yale University	2008-06-09	[MIXTURE] LIMA_SlideA (GPL1773)	RNA	Oryza sativa	other flower/sexual organ	comparing the expression pattern of heading-stage panicle in six rice lineages.
17	GSM297439	japonica_VS_javanica_A	30,000	Yale University	2008-06-09	[MIXTURE] LIMA_SlideA (GPL1773)	RNA	Oryza sativa	other flower/sexual organ	comparing the expression pattern of heading-stage panicle in six rice lineages.
18	GSM297440	japonica_VS_glaberrima_A	30,000	Yale University	2008-06-09	[MIXTURE] LIMA_SlideA (GPL1773)	RNA	Oryza sativa	other flower/sexual organ	comparing the expression pattern of heading-stage panicle in six rice lineages.
19	GSM297441	javanica_VS_glaberrima_A	30,000	Yale University	2008-06-09	[MIXTURE] LIMA_SlideA (GPL1773)	RNA	Oryza sativa	other flower/sexual organ	comparing the expression pattern of heading-stage panicle in six rice lineages.
20	GSM297442	javanica_VS_nivara_A	30,000	Yale University	2008-06-09	[MIXTURE] LIMA_SlideA (GPL1773)	RNA	Oryza sativa	other flower/sexual organ	comparing the expression pattern of heading-stage panicle in six rice lineages.

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