Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(10,585)

Viruses
(0)

Phages
(0)

Unclassified
(28)

All
(16,209)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(175)

HT-Seq
(238)

Other
(0)

All
(16,209)

muscular
(354)

adult aerial structure
(112)

young aerial structure
(185)

root
(39)

meristem/growing tissue
(50)

flower/sexual organ
(5)

seed/fruit/grain
(17)

pooled
(587)

unclassified
(4,424)

all
(16,209)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM889293	Effects of LPS on seabream red muscle, 72h, Cy5-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream red muscle, 72h, Cy5-labeled reference
2	GSM889292	Effects of LPS on seabream red muscle, 72h, Cy3-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream red muscle, 72h, Cy3-labeled reference
3	GSM889291	Effects of LPS on seabream red muscle, 24h, Cy5-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream red muscle, 24h, Cy5-labeled reference
4	GSM889290	Effects of LPS on seabream red muscle, 24h, Cy3-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream red muscle, 24h, Cy3-labeled reference
5	GSM889289	Effects of LPS on seabream white muscle, 72h, Cy5-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream white muscle, 72h, Cy5-labeled reference
6	GSM889288	Effects of LPS on seabream white muscle, 72h, Cy3-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream white muscle, 72h, Cy3-labeled reference
7	GSM889287	Effects of LPS on seabream white muscle, 24h, Cy5-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream white muscle, 24h, Cy5-labeled reference
8	GSM889030	Effects of LPS on seabream white muscle, 24h, Cy3-labeled reference	11,232	Universitat de Barcelona	2012-03-07	[cDNA Array] UKU_trout_1.8K_v1 (GPL6154)	RNA	Sparus aurata	muscle	Effects of LPS on seabream white muscle, 24h, Cy3-labeled reference
9	GSM857235	Heart	62,976	Centre for Genomic Regulation	2012-01-05	[Oligo Array] Agilent-028073 gencode_ncrna_8x60_1 (GPL15094)	RNA	Homo sapiens	heart	Heart
10	GSM857216	Skeletal Muscle	62,976	Centre for Genomic Regulation	2012-01-05	[Oligo Array] Agilent-028073 gencode_ncrna_8x60_1 (GPL15094)	RNA	Homo sapiens	muscle	Skeletal Muscle
11	GSM838975	soleus of wt Y mouse F4-4	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse F4-4 (2-3months)
12	GSM838973	soleus of wt Y mouse F4-3	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse F4-3 (2-3months)
13	GSM838971	soleus of wt Y mouse F4-2	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse F4-2 (2-3months)
14	GSM838969	soleus of wt Y mouse F4-1	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse F4-1 (2-3months)
15	GSM838967	soleus of C3KO A mouse U2-1	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of C3KO mouse U2-1 (11-12months)
16	GSM838966	soleus of C3KO Y mouse J4-2	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of C3KO mouse J4-2 (2-3months)
17	GSM838964	soleus of C3KO Y mouse J4-1	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of C3KO mouse J4-1 (2-3months)
18	GSM838962	soleus of wt A mouse X2-3	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse X2-3 (11-12months)
19	GSM838960	soleus of wt A mouse X2-2	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse X2-2 (11-12months)
20	GSM838958	soleus of wt A mouse W2-3	45,101	Donostia Hospital	2011-11-23	[GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261)	RNA	Mus musculus	muscle	soleus of wt mouse W2-3 (11-12months)

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