Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(1,101)

Vertebrates
(0)

Viruses
(0)

Phages
(0)

Unclassified
(20)

All
(2,522)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(20)

Other
(0)

All
(2,522)

reproductive
(95)

adult aerial structure
(60)

young aerial structure
(115)

root
(39)

meristem/growing tissue
(12)

flower/sexual organ
(93)

seed/fruit/grain
(33)

pooled
(45)

unclassified
(912)

all
(2,522)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM785129	JEG-3_Control_24h	65,535	National Institue of Immunology	2011-08-23	[GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188)	RNA	Homo sapiens	placenta	JEG-3 cells cultured for 24 h without any kind of exogenous treatment
2	GSM785130	JEG-3_IL11_24h	65,535	National Institue of Immunology	2011-08-23	[GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188)	RNA	Homo sapiens	placenta	JEG-3 cells stimulated with IL-11 (200ng/ml) for 24 h
3	GSM883640	JEG-3_Control	65,535	National Institue of Immunology	2012-03-01	[GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188)	RNA	Homo sapiens	placenta	JEG-3 cells cultured for 24 h without any kind of exogenous treatment
4	GSM883641	JEG-3_LIF	65,535	National Institue of Immunology	2012-03-01	[GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188)	RNA	Homo sapiens	placenta	JEG-3 cells stimulated with LIF (50 ng/ml) for 24 h
5	GSM883642	JEG-3_IL6	65,535	National Institue of Immunology	2012-03-01	[GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188)	RNA	Homo sapiens	placenta	JEG-3 cells stimulated with IL-6 (100ng/ml) for 24 h
6	GSM879913	control (Tumor cells DU-145) cultured for 6 hr 1	50,238	Central Drug Research Institute	2012-02-23	[Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252)	RNA	Homo sapiens	prostate	prostate cancer cell line
7	GSM879914	control (Tumor cells DU-145) cultured for 6 hr 2	50,238	Central Drug Research Institute	2012-02-23	[Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252)	RNA	Homo sapiens	prostate	prostate cancer cell line
8	GSM879915	Tumor cells (DU-145) cocultured with macrophages for 6hr 1	50,238	Central Drug Research Institute	2012-02-23	[Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252)	RNA	Homo sapiens	prostate	prostate cancer cell line
9	GSM879916	Tumor cells (DU-145) cocultured with macrophages for 6hr 2	50,238	Central Drug Research Institute	2012-02-23	[Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252)	RNA	Homo sapiens	prostate	prostate cancer cell line
10	GSM925071	Placenta_villi_weeks6_1	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
11	GSM925072	Placenta_villi_weeks6_2	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
12	GSM925073	Placenta_villi_weeks6_3	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
13	GSM925074	Placenta_villi_weeks6_4	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
14	GSM925075	Placenta_villi_weeks6_5	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
15	GSM925076	Placenta_villi_weeks6_6	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
16	GSM925077	Placenta_villi_weeks6_7	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
17	GSM925078	Placenta_villi_weeks6_8	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	6 weeks placental villi
18	GSM925079	Placenta_villi_weeks7_1	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	7 weeks placental villi
19	GSM925080	Placenta_villi_weeks7_2	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	7 weeks placental villi
20	GSM925081	Placenta_villi_weeks7_3	45,033	All India Institute of Medical Sciences	2012-04-30	[Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491)	RNA	Homo sapiens	placenta	7 weeks placental villi

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