Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(1,322)
  Primates
(16)
  Rodents
(385)
  Mammals
(21)
  Vertebrates
(24)
  Invertebrates
(222)
  Plants
(1,000)
  Bacteria
(231)
  Viruses
(0)
  Phages
(4)
  Unclassified
(20)
  All
(3,264)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(1,062)
  Tiling Array
(16)
  cDNA Array
(617)
  Oligo Array
(1,302)
  Bead Array
(185)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(82)
  Other
(0)
  All
(3,264)
 
  brain
(212)
  blood
(379)
  connective
(393)
  reproductive
(105)
  muscular
(50)
  digestive
(89)
  liver
(109)
  lung
(47)
  urinary
(62)
  endo/exo-crine
(41)
  embryo
(24)
  adult aerial structure
(82)
  young aerial structure
(208)
  root
(60)
  meristem/growing tissue
(13)
  flower/sexual organ
(140)
  seed/fruit/grain
(42)
  pooled
(76)
  unclassified
(1,132)
  all
(3,264)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM735050 ChIP-DNA of SKOV-3, replicate-1 237,931 Genotypic Technology 2011-06-01 [Oligo Array] Genotypic Technology designed Custom Human Promoter 244k ChIP-on-chip Array (AMADID-019469) (GPL13510) genomic Homo sapiens
Homo sapiens
ovary Input DNA from Human ovarian adenocarcinoma cells SKOV-3 IP DNA from Human ovarian adenocarcinoma cells SKOV-3
2 GSM735051 ChIP-DNA of SKOV-3, replicate-2 237,931 Genotypic Technology 2011-06-01 [Oligo Array] Genotypic Technology designed Custom Human Promoter 244k ChIP-on-chip Array (AMADID-019469) (GPL13510) genomic Homo sapiens
Homo sapiens
ovary Input DNA from Human ovarian adenocarcinoma cells SKOV-3 IP DNA from Human ovarian adenocarcinoma cells SKOV-3
3 GSM735052 ChIP-DNA of SKOV-3, replicate-3 237,931 Genotypic Technology 2011-06-01 [Oligo Array] Genotypic Technology designed Custom Human Promoter 244k ChIP-on-chip Array (AMADID-019469) (GPL13510) genomic Homo sapiens
Homo sapiens
ovary Input DNA from Human ovarian adenocarcinoma cells SKOV-3 IP DNA from Human ovarian adenocarcinoma cells SKOV-3
4 GSM735053 ChIP-DNA of SKOV-3, replicate-4 237,931 Genotypic Technology 2011-06-01 [Oligo Array] Genotypic Technology designed Custom Human Promoter 244k ChIP-on-chip Array (AMADID-019469) (GPL13510) genomic Homo sapiens
Homo sapiens
ovary Input DNA from Human ovarian adenocarcinoma cells SKOV-3 IP DNA from Human ovarian adenocarcinoma cells SKOV-3
5 GSM785129 JEG-3_Control_24h 65,535 National Institue of Immunology 2011-08-23 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells cultured for 24 h without any kind of exogenous treatment
6 GSM785130 JEG-3_IL11_24h 65,535 National Institue of Immunology 2011-08-23 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells stimulated with IL-11 (200ng/ml) for 24 h
7 GSM883640 JEG-3_Control 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells cultured for 24 h without any kind of exogenous treatment
8 GSM883641 JEG-3_LIF 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells stimulated with LIF (50 ng/ml) for 24 h
9 GSM883642 JEG-3_IL6 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells stimulated with IL-6 (100ng/ml) for 24 h
10 GSM895947 Wall Lizard whole testis from Active phase, Replicate A1 61,307 University of Delhi 2012-03-14 [Oligo Array] Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. (Agilent-026986) (GPL13381) RNA Hemidactylus flaviviridis
Hemidactylus flaviviridis
testis Wall Lizard whole testis from Active phase
11 GSM895948 Wall Lizard whole testis from Active phase, Replicate A2 61,307 University of Delhi 2012-03-14 [Oligo Array] Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. (Agilent-026986) (GPL13381) RNA Hemidactylus flaviviridis
Hemidactylus flaviviridis
testis Wall Lizard whole testis from Active phase
12 GSM895949 Wall Lizard whole testis from Recrudescent phase, Replicate B1 61,307 University of Delhi 2012-03-14 [Oligo Array] Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. (Agilent-026986) (GPL13381) RNA Hemidactylus flaviviridis
Hemidactylus flaviviridis
testis Wall Lizard whole testis from Recrudescent phase
13 GSM895950 Wall Lizard whole testis from Recrudescent phase, Replicate B2 61,307 University of Delhi 2012-03-14 [Oligo Array] Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. (Agilent-026986) (GPL13381) RNA Hemidactylus flaviviridis
Hemidactylus flaviviridis
testis Wall Lizard whole testis from Recrudescent phase
14 GSM895951 Wall Lizard whole testis from Regressed phase, Replicate C1 61,307 University of Delhi 2012-03-14 [Oligo Array] Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. (Agilent-026986) (GPL13381) RNA Hemidactylus flaviviridis
Hemidactylus flaviviridis
testis Wall Lizard whole testis from Regressed phase
15 GSM895952 Wall Lizard whole testis from Regressed phase, Replicate C2 61,307 University of Delhi 2012-03-14 [Oligo Array] Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. (Agilent-026986) (GPL13381) RNA Hemidactylus flaviviridis
Hemidactylus flaviviridis
testis Wall Lizard whole testis from Regressed phase
16 GSM879913 control (Tumor cells DU-145) cultured for 6 hr 1 50,238 Central Drug Research Institute 2012-02-23 [Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252) RNA Homo sapiens
Homo sapiens
prostate prostate cancer cell line
17 GSM879914 control (Tumor cells DU-145) cultured for 6 hr 2 50,238 Central Drug Research Institute 2012-02-23 [Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252) RNA Homo sapiens
Homo sapiens
prostate prostate cancer cell line
18 GSM879915 Tumor cells (DU-145) cocultured with macrophages for 6hr 1 50,238 Central Drug Research Institute 2012-02-23 [Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252) RNA Homo sapiens
Homo sapiens
prostate prostate cancer cell line
19 GSM879916 Tumor cells (DU-145) cocultured with macrophages for 6hr 2 50,238 Central Drug Research Institute 2012-02-23 [Oligo Array] Agilent-027114 Genotypic Technology designed Custom Human Whole Genome 8x60k Microarray (GPL13252) RNA Homo sapiens
Homo sapiens
prostate prostate cancer cell line
20 GSM925071 Placenta_villi_weeks6_1 45,033 All India Institute of Medical Sciences 2012-04-30 [Oligo Array] NimbleGen Human Gene Expression 12x135K Array [2007-09-12_HG18_opt_expr, 070925_HG18_expr] (GPL15491) RNA Homo sapiens
Homo sapiens
placenta 6 weeks placental villi
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