Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(9,834)
  Primates
(24)
  Rodents
(3,533)
  Mammals
(499)
  Vertebrates
(134)
  Invertebrates
(794)
  Plants
(2,879)
  Bacteria
(1,003)
  Viruses
(0)
  Phages
(0)
  Unclassified
(309)
  All
(19,009)
 
  SAGE NlaIII
(77)
  SAGE RsaI
(0)
  SAGE Sau3A
(3)
  MPSS
(27)
  GeneChip
(9,541)
  Tiling Array
(386)
  cDNA Array
(3,531)
  Oligo Array
(4,850)
  Bead Array
(369)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(28)
  HT-Seq
(9)
  Other
(188)
  All
(19,009)
 
  brain
(1,740)
  blood
(2,721)
  connective
(733)
  reproductive
(557)
  muscular
(801)
  digestive
(563)
  liver
(774)
  lung
(455)
  urinary
(1,107)
  endo/exo-crine
(1,751)
  embryo
(225)
  adult aerial structure
(188)
  young aerial structure
(110)
  root
(288)
  meristem/growing tissue
(146)
  flower/sexual organ
(35)
  seed/fruit/grain
(119)
  pooled
(569)
  unclassified
(6,127)
  all
(19,009)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM118375 Small RNAs from whole siliques 141,539 Whitehead Institute for Biomedical Research, MIT Department of Biology 2006-07-04 [HT Sequencing] Arabidopsis thaliana high-throughput small RNA sequencing (GPL3968) RNA Arabidopsis thaliana
Arabidopsis thaliana
other seed/fruit/grain siliques, Arabidopsis thaliana, wild-type Col-0
2 GSM138136 Genotype Domain developing seed at 5 days after anthesis, biological rep1 location SB 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
3 GSM138137 Genotype Domain developing seed at 5 days after anthesis, biological rep3 location SB 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
4 GSM138144 Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SB 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
5 GSM138145 Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
6 GSM138146 genotype G13 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
7 GSM138147 genotype G13 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
8 GSM138148 genotype F29 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
9 GSM138149 genotype F29 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
10 GSM138150 genotype H10 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
11 GSM138151 genotype H10 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
12 GSM138152 genotype G32 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
13 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
14 GSM138154 genotype H5 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
15 GSM138155 genotype H5 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
16 GSM138156 genotype DH91 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
17 GSM138157 genotype DH91 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
18 GSM138158 genotype F36 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
19 GSM138159 genotype F36 developing seed at 5 days after anthesis, biological rep3 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
20 GSM138160 genotype A91 developing seed at 5 days after anthesis, biological rep1 61,290 Agriculture and Agri-Food Canada 2006-09-28 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
other seed/fruit/grain developing seed collected from field grown material 5 days after anthesis
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