Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(63,220)		   blood
(169,267)		   connective
(49,492)		   reproductive
(38,618)		   muscular
(24,498)		   digestive
(31,399)		   liver
(51,405)		   lung
(30,850)		   urinary
(18,692)		   endo/exo-crine
(55,952)		   embryo
(18,082)		   adult aerial structure
(12,032)		   young aerial structure
(8,350)		   root
(4,764)		   meristem/growing tissue
(2,248)		   flower/sexual organ
(3,045)		   seed/fruit/grain
(3,128)		   pooled
(52,306)		   unclassified
(261,596)		   all
(898,944)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM737507 Zm_Sr5_15_2_Mock4weeks_III 17,734 Göttingen University 2011-06-05 [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) RNA Zea mays
Zea mays		 other seed/fruit/grain ears < 2 cm, 4 weeks post inoculation with S. reilianum strains 5-1 X 5-1, elongated ears with kernels
2 GSM737506 Zm_Sr5_15_2_Mock4weeks_II 17,734 Göttingen University 2011-06-05 [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) RNA Zea mays
Zea mays		 other seed/fruit/grain ears < 2 cm, 4 weeks post inoculation with S. reilianum strains 5-1 X 5-1, elongated ears with kernels
3 GSM737505 Zm_Sr5_15_2_Mock4weeks_I 17,734 Göttingen University 2011-06-05 [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) RNA Zea mays
Zea mays		 other seed/fruit/grain ears < 2 cm, 4 weeks post inoculation with S. reilianum strains 5-1 X 5-1, elongated ears with kernels
4 GSM737504 Zm_Sr5_15_2_Leafy ears4weeks_III 17,734 Göttingen University 2011-06-05 [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) RNA Zea mays
Zea mays		 other seed/fruit/grain ears < 2 cm, 4 weeks post inoculation with S. reilianum strains 5-1 X 5-1, elongated ears with kernels
5 GSM737503 Zm_Sr5_15_2_Leafy ears4weeks_II 17,734 Göttingen University 2011-06-05 [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) RNA Zea mays
Zea mays		 other seed/fruit/grain ears < 2 cm, 4 weeks post inoculation with S. reilianum strains 5-1 X 5-1, elongated ears with kernels
6 GSM737502 Zm_Sr5_15_2_Leafy ears4weeks_I 17,734 Göttingen University 2011-06-05 [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) RNA Zea mays
Zea mays		 other seed/fruit/grain ears < 2 cm, 4 weeks post inoculation with S. reilianum strains 5-1 X 5-1, elongated ears with kernels
7 GSM769661 Zhonghua_6D, biological rep2 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 6DAF
8 GSM769660 Zhonghua_6D, biological rep1 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 6DAF
9 GSM769657 Zhonghua_4D_2DC, biological rep2 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 4DAF with 2 day low temperature treatment
10 GSM769656 Zhonghua_4D_2DC, biological rep1 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 4DAF with 2 day low temperature treatment
11 GSM769659 Zhonghua_4D, biological rep2 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 4DAF
12 GSM769658 Zhonghua_4D, biological rep1 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 4DAF
13 GSM769655 Zhonghua_12D, biological rep2 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 12DAF
14 GSM769654 Zhonghua_12D, biological rep1 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 12DAF
15 GSM769651 Zhonghua_10D_2DC, biological rep2 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 10DAF with 2 day low temperature treatment
16 GSM769650 Zhonghua_10D_2DC, biological rep1 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 10DAF with 2 day low temperature treatment
17 GSM769653 Zhonghua_10D, biological rep2 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 10DAF
18 GSM769652 Zhonghua_10D, biological rep1 57,381 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2011-07-31 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Rice seed of Zhonghua at 10DAF
19 GSM240996 Zhonghua11 7 DAF, biological replicate 3 57,381 Institute of plant physiology & ecology, SIBS, CAS 2007-11-01 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Oryza sativa_Zhonghua11 Caryopsis, 7 DAF
20 GSM240995 Zhonghua11 7 DAF, biological replicate 2 57,381 Institute of plant physiology & ecology, SIBS, CAS 2007-11-01 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 other seed/fruit/grain Oryza sativa_Zhonghua11 Caryopsis, 7 DAF
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