Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,283)		   Primates
(80)		   Rodents
(6,896)		   Mammals
(298)		   Vertebrates
(469)		   Invertebrates
(517)		   Plants
(5,385)		   Bacteria
(1,328)		   Viruses
(9)		   Phages
(0)		   Unclassified
(100)		   All
(31,365)		  
  SAGE NlaIII
(28)		   SAGE RsaI
(3)		   SAGE Sau3A
(0)		   MPSS
(79)		   GeneChip
(13,710)		   Tiling Array
(988)		   cDNA Array
(2,586)		   Oligo Array
(13,249)		   Bead Array
(523)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(24)		   HT-Seq
(160)		   Other
(15)		   All
(31,365)		  
  brain
(2,396)		   blood
(3,718)		   connective
(1,227)		   reproductive
(1,401)		   muscular
(340)		   digestive
(1,971)		   liver
(2,840)		   lung
(1,478)		   urinary
(419)		   endo/exo-crine
(1,090)		   embryo
(971)		   adult aerial structure
(1,248)		   young aerial structure
(418)		   root
(391)		   meristem/growing tissue
(349)		   flower/sexual organ
(345)		   seed/fruit/grain
(169)		   pooled
(775)		   unclassified
(9,819)		   all
(31,365)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1092106 input vs Alx3 IP 0 Showa University 2013-03-04 [Oligo Array] Agilent-028383 SurePrint G3 Mouse Promoter Microarray 1x1M (GPL16743) genomic Mus musculus
Mus musculus		 unclassified source_name:input DNA FLAG-IP DNA title:input vs Alx3 IP description:FLAG-binding DNA analysis using Agilent Mouse promoter 1M microarray
2 GSM1071262 AtT20 cell_48hr_control_rep1 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, control, replicate 1 title:AtT20 cell_48hr_control_rep1 description:Gene expression in AtT20 cells (control)
3 GSM1071263 AtT20 cell_48hr_control_rep2 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, control, replicate 2 title:AtT20 cell_48hr_control_rep2 description:Gene expression in AtT20 cells (control)
4 GSM1071264 AtT20 cell_48hr_control_rep3 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, control, replicate 3 title:AtT20 cell_48hr_control_rep3 description:Gene expression in AtT20 cells (control)
5 GSM1071265 AtT20 cell_48hr_control_rep4 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, control, replicate 4 title:AtT20 cell_48hr_control_rep4 description:Gene expression in AtT20 cells (control)
6 GSM1071266 AtT20 cell_48hr_HX630 10μM_rep1 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, HX630 μM, replicate 1 title:AtT20 cell_48hr_HX630 10μM_rep1 description:Gene expression in AtT20 cells treated with HX630 at 10 μM for 48 hr
7 GSM1071267 AtT20 cell_48hr_HX630 10μM_rep2 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, HX630 μM, replicate 2 title:AtT20 cell_48hr_HX630 10μM_rep2 description:Gene expression in AtT20 cells treated with HX630 at 10 μM for 48 hr
8 GSM1071268 AtT20 cell_48hr_HX630 10μM_rep3 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, HX630 μM, replicate 3 title:AtT20 cell_48hr_HX630 10μM_rep3 description:Gene expression in AtT20 cells treated with HX630 at 10 μM for 48 hr
9 GSM1071269 AtT20 cell_48hr_HX630 10μM_rep4 39,485 Tohoku University Graduate School of Medicine 2013-01-27 [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) RNA Mus musculus
Mus musculus		 unclassified source_name:AtT20 cell, 48hr, HX630 μM, replicate 4 title:AtT20 cell_48hr_HX630 10μM_rep4 description:Gene expression in AtT20 cells treated with HX630 at 10 μM for 48 hr
10 GSM1070468 GSC03A_Sphere_2day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03A cultured for 2 days without FCS title:GSC03A_Sphere_2day
11 GSM1070469 GSC03U_Sphere_2day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03U cultured for 2 days without FCS title:GSC03U_Sphere_2day
12 GSM1070470 GSC03A_Sphere_7day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03A cultured for 7 days without FCS title:GSC03A_Sphere_7day
13 GSM1070471 GSC03U_Sphere_7day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03U cultured for 7 days without FCS title:GSC03U_Sphere_7day
14 GSM1070472 GSC03A_Differentiation_2day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03A cultured for 2 days with FCS title:GSC03A_Differentiation_2day
15 GSM1070473 GSC03U_Differentiation_2day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03U cultured for 2 days with FCS title:GSC03U_Differentiation_2day
16 GSM1070474 GSC03A_Differentiation_7day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03A cultured for 7 days with FCS title:GSC03A_Differentiation_7day
17 GSM1070475 GSC03U_Differentiation_7day 54,675 kumamoto university 2013-01-25 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens		 unclassified source_name:GIC03U cultured for 7 days with FCS title:GSC03U_Differentiation_7day
18 GSM1070148 Peri-implant soft tissue 1 31,099 Tokyo Dental College 2013-01-24 [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:Tooth extraction and implant placement title:Peri-implant soft tissue 1 description:Gene expression data from peri-implant soft tissue
19 GSM1070150 Peri-implant soft tissue 2 31,099 Tokyo Dental College 2013-01-24 [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:Tooth extraction and implant placement title:Peri-implant soft tissue 2 description:Gene expression data from peri-implant soft tissue
20 GSM1070152 Peri-implant soft tissue 3 31,099 Tokyo Dental College 2013-01-24 [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:Tooth extraction and implant placement title:Peri-implant soft tissue 3 description:Gene expression data from peri-implant soft tissue
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