Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(76,365)
  blood
(211,180)
  connective
(60,911)
  reproductive
(45,577)
  muscular
(29,295)
  digestive
(39,046)
  liver
(61,369)
  lung
(38,619)
  urinary
(26,574)
  endo/exo-crine
(67,274)
  embryo
(23,689)
  adult aerial structure
(15,762)
  young aerial structure
(9,385)
  root
(5,771)
  meristem/growing tissue
(2,624)
  flower/sexual organ
(3,659)
  seed/fruit/grain
(3,781)
  pooled
(57,690)
  unclassified
(322,740)
  all
(1,101,311)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM2093 ACHN_CL9023_RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool ACHN_CL9023_RENAL
2 GSM2097 SN12C_CL9008__RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool SN12C_CL9008__RENAL
3 GSM2100 RXF-393_CL9016__RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool RXF-393_CL9016__RENAL
4 GSM2104 UO-31_CL9004__RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool UO-31_CL9004__RENAL
5 GSM2119 TK-10_CL9024_RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool TK-10_CL9024_RENAL
6 GSM2128 786-0__CL9018_RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool 786-0__CL9018_RENAL
7 GSM2132 A498_CL9013_RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool A498_CL9013_RENAL
8 GSM2141 SNB-75_CL12005_RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference_Pool SNB-75_CL12005_RENAL
9 GSM2147 CAKI-1 (CL9015) RENAL 9,984 Stanford Microarray Database (SMD) 2002-06-21 [cDNA Array] 10k_Print3 (GPL167) RNA Homo sapiens
Homo sapiens
kidney Reference Pool CAKI-1 (CL9015) RENAL
10 GSM121652 293: H3 K4 from HR193 (80K 40% piure) 388,308 National Cancer Institute 2006-07-19 [Oligo Array] 2005-04-04_Human_Promo_ChIP (GPL4016) genomic Homo sapiens
Homo sapiens
kidney 293: H3 K4 from HR193 (80K 40% piure)
11 GSM68974 3_kidney_sg1 19,579 Institute for Molecular Bioscience, Uni of Qld 2005-08-09 [cDNA Array] 20K RIKEN cDNA array (GPL2732) RNA Mus musculus
Mus musculus
kidney Tissue Type: kidney Common Reference: 17.5dpc total embryo
12 GSM68975 3_kidney_sg2 19,579 Institute for Molecular Bioscience, Uni of Qld 2005-08-09 [cDNA Array] 20K RIKEN cDNA array (GPL2732) RNA Mus musculus
Mus musculus
kidney Tissue Type: kidney Common Reference: 17.5dpc total embryo
13 GSM706177 HEK293 cells transfected with eEF1Bdelta1 or eEF1BdeltaL 24,267 Graduate School of Life Sciences, Kumamoto University 2011-04-10 [Oligo Array] 3D-Gene Human Oligo chip 25k (GPL5639) RNA Homo sapiens
Homo sapiens
kidney HEK293 cells, transfected with eEF1Bdelta1 HEK293 cells, transfected with eEF1BdeltaL
14 GSM142303 GS MGII NEW 5637 Rd v's sigma male Grn (1) 020802 21,417 Institute of Cancer Research 2006-10-25 [cDNA Array] 3x19plt b 15 7 02 (GPL4482) genomic Homo sapiens
Homo sapiens
bladder 5637(Genomic Cell line DNA) Sigma Genomic Male(Commercial Genomic Male DNA)
15 GSM142304 GS MGII NEW HT-1197 Rd v's sigma male Grn (1) merged 020802 21,417 Institute of Cancer Research 2006-10-25 [cDNA Array] 3x19plt b 15 7 02 (GPL4482) genomic Homo sapiens
Homo sapiens
bladder HT1197(HT1197 Genomic Cell line DNA) Sigma Genomic Male(Commercial Genomic Male DNA)
16 GSM142305 GS MGII HT-1376 Rd v's sigma male Grn (1) 020802 21,417 Institute of Cancer Research 2006-10-25 [cDNA Array] 3x19plt b 15 7 02 (GPL4482) genomic Homo sapiens
Homo sapiens
bladder HT1376(HT1376 Genomic Cell line DNA) Sigma Genomic Male(Commercial Genomic Male DNA)
17 GSM142306 GS MGII T110 Rd V's sgima male Grn merged. 160802 21,417 Institute of Cancer Research 2006-10-25 [cDNA Array] 3x19plt b 15 7 02 (GPL4482) genomic Homo sapiens
Homo sapiens
bladder T110(Primary Bladder Tumour DNA) Sigma Genomic Male(Commercial Genomic Male DNA)
18 GSM142307 GS MGII T63 Rd V's sgima male Grn merged 160802 21,417 Institute of Cancer Research 2006-10-25 [cDNA Array] 3x19plt b 15 7 02 (GPL4482) genomic Homo sapiens
Homo sapiens
bladder T63(Primary Bladder Tumour DNA) Sigma Genomic Male(Commercial Genomic Male DNA)
19 GSM142308 GS MGII NEW TCCSUP Rd v's sigma male Grn (1) 020802 21,417 Institute of Cancer Research 2006-10-25 [cDNA Array] 3x19plt b 15 7 02 (GPL4482) genomic Homo sapiens
Homo sapiens
bladder TCCSUP(TCCSUP Genomic Cell line DNA) Sigma Genomic Male(Commercial Genomic Male DNA)
20 GSM337571 endogenous small RNA associated to human Argonaute 2 11,127 Max Planck Institute of Biochemistry 2008-10-27 [HT Sequencing] 454 GS 20 (Homo sapiens) (GPL9178) SRA Homo sapiens
Homo sapiens
kidney HEK293 cells
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