Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(11,237)
  Primates
(55)
  Rodents
(3,938)
  Mammals
(293)
  Vertebrates
(491)
  Invertebrates
(722)
  Plants
(2,487)
  Bacteria
(1,010)
  Viruses
(0)
  Phages
(0)
  Unclassified
(83)
  All
(20,316)
 
  SAGE NlaIII
(10)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(6)
  GeneChip
(11,766)
  Tiling Array
(278)
  cDNA Array
(3,525)
  Oligo Array
(4,164)
  Bead Array
(465)
  Protein Array
(0)
  Antibody
(44)
  RT-PCR
(0)
  HT-Seq
(54)
  Other
(4)
  All
(20,316)
 
  brain
(1,619)
  blood
(3,294)
  connective
(641)
  reproductive
(912)
  muscular
(861)
  digestive
(522)
  liver
(1,233)
  lung
(572)
  urinary
(255)
  endo/exo-crine
(1,006)
  embryo
(277)
  adult aerial structure
(332)
  young aerial structure
(269)
  root
(93)
  meristem/growing tissue
(107)
  flower/sexual organ
(97)
  seed/fruit/grain
(62)
  pooled
(2,431)
  unclassified
(5,733)
  all
(20,316)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM244778 10_CON.I2W2.CEL, Experimental replicate 2 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure CONRAD - P.sojae inoculated; 48 hrs; ExpRep2 Data was collected from the hypocotyl regions of Soybean plants at different time points
2 GSM244779 10_SLO.M1W4.CEL, Experimental replicate 4 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure SLOAN - Mock inoculated; 24 hrs; ExpRep4 Data was collected from the hypocotyl regions of Soybean plants at different time points
3 GSM244780 10_V71.M3W3.CEL, Experimental replicate 3 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure V71-370 - Mock inoculated; 72 hrs; ExpRep3 Data was collected from the hypocotyl regions of Soybean plants at different time points
4 GSM244781 10_VP9.I3L1.CEL, Experimental replicate 1 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure VP-RIL9 - P.sojae inoculated; 72 hrs (lower); ExpRep1 Data was collected from the hypocotyl regions of Soybean plants at different time points
5 GSM244782 11_CON.I2W3.CEL, Experimental replicate 3 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure CONRAD - P.sojae inoculated; 48 hrs; ExpRep3 Data was collected from the hypocotyl regions of Soybean plants at different time points
6 GSM244783 11_CON.M5W1.CEL, Experimental replicate 1 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure CONRAD - Mock inoculated; 120 hrs; ExpRep1 Data was collected from the hypocotyl regions of Soybean plants at different time points
7 GSM244784 11_VP9.I5L4.CEL, Experimental replicate 4 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure VP-RIL9 - P.sojae inoculated; 120 hrs (lower); ExpRep4 Data was collected from the hypocotyl regions of Soybean plants at different time points
8 GSM244785 11_VP9.M3W2.CEL, Experimental replicate 2 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure VP-RIL9 - Mock inoculated; 72 hrs; ExpRep2 Data was collected from the hypocotyl regions of Soybean plants at different time points
9 GSM244786 12_CON.M5W4.CEL, Experimental replicate 4 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure CONRAD - Mock inoculated; 120 hrs; ExpRep4 Data was collected from the hypocotyl regions of Soybean plants at different time points
10 GSM244787 12_V71.I5L2.CEL, Experimental replicate 2 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure V71-370 - P.sojae inoculated; 120 hrs (lower); ExpRep2 Data was collected from the hypocotyl regions of Soybean plants at different time points
11 GSM244788 12_V71.M1W1.CEL, Experimental replicate 1 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure V71-370 - Mock inoculated; 24 hrs; ExpRep1 Data was collected from the hypocotyl regions of Soybean plants at different time points
12 GSM244789 12_VP9.M5W3.CEL, Experimental replicate 3 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure VP-RIL9 - Mock inoculated; 120 hrs; ExpRep3 Data was collected from the hypocotyl regions of Soybean plants at different time points
13 GSM244790 13_SLO.I1W3.CEL, Experimental replicate 3 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure SLOAN - P.sojae inoculated; 24 hrs; ExpRep3 Data was collected from the hypocotyl regions of Soybean plants at different time points
14 GSM244791 13_SLO.I2W1.CEL, Experimental replicate 1 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure SLOAN - P.sojae inoculated; 48 hrs; ExpRep1 Data was collected from the hypocotyl regions of Soybean plants at different time points
15 GSM244792 13_SLO.I5U2.CEL, Experimental replicate 2 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure SLOAN - P.sojae inoculated; 120 hrs (upper); ExpRep2 Data was collected from the hypocotyl regions of Soybean plants at different time points
16 GSM244793 13_VP9.I2W4.CEL, Experimental replicate 4 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure VP-RIL9 - P.sojae inoculated; 48 hrs; ExpRep4 Data was collected from the hypocotyl regions of Soybean plants at different time points
17 GSM244794 14_CON.I1W4.CEL, Experimental replicate 4 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure CONRAD - P.sojae inoculated; 24 hrs; ExpRep4 Data was collected from the hypocotyl regions of Soybean plants at different time points
18 GSM244795 14_CON.M3W3.CEL, Experimental replicate 3 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure CONRAD - Mock inoculated; 72 hrs; ExpRep3 Data was collected from the hypocotyl regions of Soybean plants at different time points
19 GSM244796 14_SLO.I5L1.CEL, Experimental replicate 1 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure SLOAN - P.sojae inoculated; 120 hrs (lower); ExpRep1 Data was collected from the hypocotyl regions of Soybean plants at different time points
20 GSM244797 14_VP9.I2W2.CEL, Experimental replicate 2 61,170 Virginia Tech 2007-11-26 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
young aerial structure VP-RIL9 - P.sojae inoculated; 48 hrs; ExpRep2 Data was collected from the hypocotyl regions of Soybean plants at different time points
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