Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 A Transcriptomic Analysis of Land Use Impacts on the Oyster, Crassostrea virginica, in the South Atlantic Bight. (GSE14793) [cDNA Array] Hollings Marine Laboratory Crassostrea cDNA Array (GPL3994) Medical University South Carolina 2009-02-11 Crassostrea virginica
Crassostrea virginica		 16,020,000
(30,000 x 534) 		266 268 by_platform
by_series
2 DNA copy number profiles of NSCLC tumors (GSE31798) [cDNA Array] BCCRC whole genome tilling path array v2 (March 2006 build) (GPL14360) BC Cancer Research Centre 2011-08-31 Homo sapiens
Homo sapiens		 14,594,976
(53,856 x 271) 		271 by_platform
by_series
3 DNA copy number and gene expression profiles of resected non-small cell lung cancer tumors (GSE31800) [cDNA Array] BCCRC whole genome tilling path array v2 (March 2006 build) (GPL14360) BC Cancer Research Centre 2011-08-31 Homo sapiens
Homo sapiens		 14,594,976
(53,856 x 271) 		271 by_platform
by_series
4 rilkit-eqtl analysis (random pair design). Tools to optimize the use of RIL populations for natural diversity studies and QTL cloning (GSE28791) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2011-04-21 Arabidopsis thaliana
Arabidopsis thaliana		 11,225,628
(34,647 x 324) 		324 by_platform
by_series
5 The impact of experience-dependent and independent factors on gene expression in songbird brain (GSE36748) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2012-03-23 Taeniopygia guttata,Sturnus vulgaris
Taeniopygia guttata,Sturnus vulgaris		 9,838,080
(20,160 x 488) 		488 by_platform
by_series
6 An atlas of mRNA expression in pig adipose and muscle tissues (GSE30343) [cDNA Array] Agilent-020109 Porcine Gene Expression Microarray (44K) (Probe Name version) (GPL10162) Sichuan Agricultural University 2011-06-30 Sus scrofa
Sus scrofa domestica		 7,848,540
(43,603 x 180) 		108 36 36 by_platform
by_series
7 Major Patterns of B Cell Gene Expression Changes in Response to Short-Term Stimulation with 33 Single Ligands (GSE2050) [cDNA Array] Caltech 16K cDNA Mouse Array (GPL260) California Institute of Technology 2004-12-08 Mus musculus
Mus musculus		 6,867,206
(16,273 x 422) 		422 by_platform
by_series
8 Regulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids (GSE16136) [cDNA Array] SAM1.1a (GPL3333) Iowa State University 2009-05-15 Zea mays
Zea mays		 6,624,000
(19,200 x 345) 		345 by_platform
by_series
9 Subclassification of lung adenocarcinoma (GSE20853) [cDNA Array] CHUGAI 41K (GPL962) Kyoto University 2010-03-12 Homo sapiens
Homo sapiens		 6,620,352
(40,368 x 164) 		164 by_platform
by_series
10 Gene expression profiles in liver of pigs with extreme high and low levels of androstenone. (GSE11073) [cDNA Array] DJF Pig 55K v1 (GPL6173) Aarhus University, Faculty of Agricultural Sciences 2008-04-05 Sus scrofa
Sus scrofa domestica		 6,436,608
(55,488 x 116) 		116 by_platform
by_series
11 Renal Cell Carcinoma Differential Expression (GSE3) [cDNA Array] Human Unigene I, part 1 (GPL9) German Cancer Research Center 2001-07-19 Homo sapiens
Homo sapiens		 6,303,744
(36,864 x 171) 		5 162 4 by_platform
by_series
12 Renal Cell Carcinoma Differential Expression (GSE3) [cDNA Array] Human Unigene I, part 2 (GPL10) German Cancer Research Center 2001-07-19 Homo sapiens
Homo sapiens		 6,303,744
(36,864 x 171) 		5 162 4 by_platform
by_series
13 Analysis of the Saccharomyces cerevisiae Pan-Genome Reveals a Pool of Copy Number Variants Distributed in Diverse Yeast Strains From Differing Industrial Environments. (GSE26689) [cDNA Array] Agilent 024417 Saccharomyces bayanus and Saccharomyces cerevisiae (SMD Print_1667) (GPL11575) Stanford University 2011-01-18 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 6,171,648
(62,976 x 98) 		98 by_platform
by_series
14 Gene expression programs in PBMCs elicited by 6 major mediators of the immune response. (GSE17762) [cDNA Array] SMD Print_1163 Homo sapiens (GPL8601) University of London Tooting 2009-08-21 Homo sapiens
Homo sapiens		 5,856,384
(38,784 x 151) 		76 75 by_platform
by_series
15 Response of quiescent human fibroblasts to different growth factors and serum (GSE3901) [cDNA Array] Iyer Lab Human 46K cDNA microarray (GPL3279) University of Texas at Austin 2005-12-23 Homo sapiens
Homo sapiens		 5,576,040
(46,467 x 120) 		60 60 by_platform
by_series
16 Monkeypox and Vaccinia infection of cultured human cells (GSE11234) [cDNA Array] Print_1046 (GPL6762) Whitehead Institute for Biomedical Research 2008-04-22 Homo sapiens
Homo sapiens		 5,285,376
(42,624 x 124) 		85 39 by_platform
by_series
17 Stunned silence: gene expression programs in human cells infected with Monkeypox or Vaccinia virus (GSE24125) [cDNA Array] SMD Print_1046 LC-48 Homo sapiens (GPL10912) Stanford university school of medicine 2010-09-14 Homo sapiens
Homo sapiens		 5,285,376
(42,624 x 124) 		84 39 1 by_platform
by_series
18 NIA/NIH AGEMAP Multiple Tissues (GSE9909) [cDNA Array] NIA Mouse 17K_A (GPL738) National Institute on Aging, NIH 2007-12-14 Mus musculus
Mus musculus		 5,271,552
(8,448 x 624) 		239 116 39 78 32 40 40 40 by_platform
by_series
19 NIA/NIH AGEMAP Multiple Tissues (GSE9909) [cDNA Array] NIA Mouse 17K_B (GPL782) National Institute on Aging, NIH 2007-12-14 Mus musculus
Mus musculus		 5,271,552
(8,448 x 624) 		239 116 39 78 32 40 40 40 by_platform
by_series
20 Microarray CGH Profiling Of Serous Ovarian Tumours Identifies Novel Copy Number Alterations Associated with Patient Survival (GSE29503) [cDNA Array] Mermaid_Human_32K_CGH_v1.0 (GPL6853) UCL EGA Institute for Women's Health 2011-05-24 Homo sapiens
Homo sapiens		 5,184,204
(31,611 x 164) 		110 54 by_platform
by_series
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