Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(808)		   Primates
(6)		   Rodents
(475)		   Mammals
(45)		   Vertebrates
(47)		   Invertebrates
(302)		   Plants
(266)		   Bacteria
(116)		   Viruses
(1)		   Phages
(0)		   Unclassified
(8)		   All
(2,076)		  
  SAGE NlaIII
(14)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(3)		   GeneChip
(661)		   Tiling Array
(217)		   cDNA Array
(85)		   Oligo Array
(561)		   Bead Array
(208)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(28)		   HT-Seq
(296)		   Other
(1)		   All
(2,076)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine (P. taeda L.). (GSE25216) [cDNA Array] Loblolly pine 26K cDNA array v2.0, PtGen2 (GPL11184) University of Georgia 2010-11-09 Pinus taeda
Pinus taeda		 3,815,424
(26,496 x 144) 		144 by_platform
by_series
2 Expression profiles of human adipose tissue, adipocytes and stromal-vascular pellet cells from multiple body sites (GSE25194) [cDNA Array] SMD Print_1484 hoz (GPL11179) Stanford School of Medicine 2010-11-08 Homo sapiens
Homo sapiens		 3,429,888
(44,544 x 77) 		56 7 14 by_platform
by_series
3 Expression profiles of human adipose tissue, adipocytes and stromal-vascular pellet cells from multiple body sites (GSE25194) [cDNA Array] SMD Print_1437 hov (GPL11176) Stanford School of Medicine 2010-11-08 Homo sapiens
Homo sapiens		 2,939,904
(44,544 x 66) 		56 10 by_platform
by_series
4 gene profiling in silencing suppressor plants or in mirna mutants-Transcriptional and post-transcriptional changes in Arabidopsis plants that constitutively express suppressors of RNA silencing (GSE24693) [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.3 (GPL6403) INRA - CNRS - UEVE 2010-10-14 Arabidopsis thaliana
Arabidopsis thaliana		 2,072,000
(25,900 x 80) 		80 by_platform
by_series
5 Transcriptional and post-transcriptional changes in Arabidopsis plants that constitutively express suppressors of RNA silencing (GSE24837) [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.3 (GPL6403) INRA - CNRS - UEVE 2010-10-20 Arabidopsis thaliana
Arabidopsis thaliana		 2,072,000
(25,900 x 80) 		80 by_platform
by_series
6 Expression profiles of human adipose tissue, adipocytes and stromal-vascular pellet cells from multiple body sites (GSE25194) [cDNA Array] SMD Print_1448 hox (GPL11178) Stanford School of Medicine 2010-11-08 Homo sapiens
Homo sapiens		 1,603,584
(44,544 x 36) 		26 1 7 2 by_platform
by_series
7 Characterization of whole blood gene expression profiles of healthy miniature pigs with increasing age (GSE25393) [cDNA Array] Agilent-020109 Porcine Gene Expression Microarray (44K) (Probe Name version) (GPL10162) National Institute of Advanced Industrial Science and Technology　(AIST) 2010-11-15 Sus scrofa
Sus scrofa domestica		 1,351,693
(43,603 x 31) 		31 by_platform
by_series
8 Expression profiles of human adipose tissue, adipocytes and stromal-vascular pellet cells from multiple body sites (GSE25194) [cDNA Array] SMD Print_1372 hor (GPL11175) Stanford School of Medicine 2010-11-08 Homo sapiens
Homo sapiens		 1,202,688
(44,544 x 27) 		17 10 by_platform
by_series
9 rnai tor time course - The signalization way TOR/PTEN in Arabidopsis (GSE25701) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-11-30 Arabidopsis thaliana
Arabidopsis thaliana		 970,116
(34,647 x 28) 		28 by_platform
by_series
10 bzip9-Energetic Homeostasis and Sugar Signaling (GSE26041) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-12-14 Arabidopsis thaliana
Arabidopsis thaliana		 831,528
(34,647 x 24) 		24 by_platform
by_series
11 abi4-Energetic Homeostasis and Sugar Signaling (GSE26044) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-12-14 Arabidopsis thaliana
Arabidopsis thaliana		 831,528
(34,647 x 24) 		24 by_platform
by_series
12 cordycepin-Energetic Homeostasis and Sugar Signaling (GSE26045) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-12-14 Arabidopsis thaliana
Arabidopsis thaliana		 831,528
(34,647 x 24) 		24 by_platform
by_series
13 Integrated mutation, copy number and expression profiling in resectable non-small cell lung cancer (GSE25326) [cDNA Array] PMCC Human 10.5K (GPL11205) Peter Mac Callum cancer Centre 2010-11-14 Homo sapiens
Homo sapiens		 827,985
(9,741 x 85) 		27 20 38 by_platform
by_series
14 rnai tor time course - The signalization way TOR/PTEN in Arabidopsis (GSE25701) [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.3 (GPL6403) INRA 2010-11-30 Arabidopsis thaliana
Arabidopsis thaliana		 725,200
(25,900 x 28) 		28 by_platform
by_series
15 The stress response factors Yap6, Cin5, Phd1, and Skn7 direct targeting of the conserved co-repressor Tup1-Ssn6 (GSE26311) [cDNA Array] UNC-CH_Yeast Whole-genome Array (PCR-based) (GPL11024) SUNY at Buffalo 2010-12-27 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 692,865
(15,397 x 45) 		45 by_platform
by_series
16 Arctic charr exposed to acute thermal stress (GSE26306) [cDNA Array] cGRASP 32K (Salmonid) cDNA - Release Date 02/08 (GPL10096) Simon Fraser University 2010-12-27 Salvelinus alpinus,Salmo salar
Salvelinus alpinus,Salmo salar		 606,528
(33,696 x 18) 		18 by_platform
by_series
17 lst8 - The signalisation way TOR/PTEN in Arabidopsis (GSE25731) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-12-01 Arabidopsis thaliana
Arabidopsis thaliana		 554,352
(34,647 x 16) 		16 by_platform
by_series
18 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GSE25893) [cDNA Array] Whole-Genome TilePath (WGTP) array (GPL13331) The Hospital for Sick Children 2010-12-07 Homo sapiens
Homo sapiens		 518,994
(28,833 x 18) 		18 by_platform
by_series
19 Biodiversity and functional genomics of endogenous small RNAs induced upon biotic and abiotic stresses in plant (gemsup) (GSE24475) [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.3 (GPL6403) INRA 2010-10-01 Arabidopsis thaliana
Arabidopsis thaliana		 466,200
(25,900 x 18) 		18 by_platform
by_series
20 Effects of Genistein on LNCaP Gene Expression (GSE24796) [cDNA Array] SHER (GPL3525) Stanford University Medical Center 2010-10-19 Homo sapiens
Homo sapiens		 457,248
(41,568 x 11) 		11 by_platform
by_series
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