Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(743)
  Primates
(5)
  Rodents
(386)
  Mammals
(31)
  Vertebrates
(51)
  Invertebrates
(187)
  Plants
(209)
  Bacteria
(89)
  Viruses
(1)
  Phages
(0)
  Unclassified
(12)
  All
(1,715)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(559)
  Tiling Array
(136)
  cDNA Array
(101)
  Oligo Array
(596)
  Bead Array
(143)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(3)
  HT-Seq
(171)
  Other
(2)
  All
(1,715)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Subclassification of lung adenocarcinoma (GSE20853) [cDNA Array] CHUGAI 41K (GPL962) Kyoto University 2010-03-12 Homo sapiens
Homo sapiens
6,620,352
(40,368 x 164)
164 by_platform
by_series
2 Clinical implications of gene dosage and gene expression patterns in diploid breast carcinoma (CGH) (GSE20483) [cDNA Array] SWEGENE_BAC_38K (GPL9077) University of Gothenburg 2010-02-23 Homo sapiens
Homo sapiens
4,050,720
(41,760 x 97)
97 by_platform
by_series
3 Clinical implications of gene dosage and gene expression patterns in diploid breast carcinoma (GSE20486) [cDNA Array] SWEGENE_BAC_38K (GPL9077) University of Gothenburg 2010-02-23 Homo sapiens
Homo sapiens
4,050,720
(41,760 x 97)
97 by_platform
by_series
4 ISD-starch (initiation, synthesis, and degradation): an integrated approach toward the understanding of starch metabolism and formation in plants (GSE20964) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-03-19 Arabidopsis thaliana
Arabidopsis thaliana
3,326,112
(34,647 x 96)
96 by_platform
by_series
5 Subtype classification, grading, and outcome prediction of urothelial carcinomas by combined mRNA profiling and aCGH (GSE19915) [cDNA Array] Swegene Human 27K RAP UniGene188 array (GPL3883) Lund University 2010-01-15 Homo sapiens
Homo sapiens
2,322,432
(27,648 x 84)
84 by_platform
by_series
6 Breast cancer endothelial interaction (GSE20364) [cDNA Array] SMD Print_1214 Homo sapiens (GPL10054) Stanford Microarray Database (SMD) 2010-02-16 Homo sapiens
Homo sapiens
1,978,368
(43,008 x 46)
4 24 12 6 by_platform
by_series
7 Salvelinus Microarray experiment: selected line vs control line (GSE20490) [cDNA Array] cGRASP 32K (Salmonid) cDNA - Release Date 02/08 (GPL10096) University Laval 2010-02-23 Salvelinus fontinalis
Salvelinus fontinalis
1,347,840
(33,696 x 40)
40 by_platform
by_series
8 Novel aspects of the transcriptional stress response in the paraventricular nucleus of the mouse strains DBA/2J and C57BL/6J (GSE20877) [cDNA Array] MPIP24K (GPL7467) MPI of Psychiatry 2010-03-15 Mus musculus
Mus musculus
1,209,600
(24,192 x 50)
50 by_platform
by_series
9 Gilthead seabream pathogen exposure to Enteromyxum leei (GSE20619) [cDNA Array] AQUAFIRST_seabream_18K_Ver1 (GPL8467) NUI Galway 2010-03-04 Sparus aurata
Sparus aurata
1,169,280
(38,976 x 30)
30 by_platform
by_series
10 Sex bias and dosage compensation in the zebra finch versus chicken genomes: general and specialized patterns among birds (GSE20035) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2010-01-25 Taeniopygia guttata
Taeniopygia guttata
967,680
(20,160 x 48)
48 by_platform
by_series
11 Rheumatoid arthritis and anti-TNF treatment (GSE19821) [cDNA Array] SMD Print_1015 Homo sapiens (GPL9869) EULAR & FOCIS Center of Excellence 2010-01-10 Homo sapiens
Homo sapiens
953,856
(41,472 x 23)
23 by_platform
by_series
12 Molecular profiling identifies prognostic subgroups of pediatric glioblastoma and shows increased tumor YB-1 expression (GSE20018) [cDNA Array] NRC-BRI human 19K cDNA spotted array (GPL9966) National Research Council of Canada 2010-01-22 Homo sapiens
Homo sapiens
904,020
(15,067 x 60)
60 by_platform
by_series
13 Transcriptome profie of rice in response to temperature and oxidative stress (GSE19983) [cDNA Array] DPMB/AG Lab Agilent Rice array (4x44K) AMADID No. 15241 (GPL9956) University of Delhi South Campus 2010-01-21 Oryza sativa Indica Group
Oryza sativa Indica Group
890,778
(42,418 x 21)
21 by_platform
by_series
14 Lake Whitefish microarray experiment: dwarf vs normal ecotypes (GSE21130) [cDNA Array] GRASP 16K version 2 (GPL2716) Université Laval 2010-03-30 Coregonus clupeaformis
Coregonus clupeaformis
831,744
(17,328 x 48)
48 by_platform
by_series
15 FBLN1 and FABP4 are drivers of resistance to fleece rot in Australian Merino sheep (GSE21022) [cDNA Array] Ovine-Bovine 12K cDNA array (GPL10240) CSIRO 2010-03-23 Ovis aries
Ovis aries
752,928
(24,288 x 31)
31 by_platform
by_series
16 Menopause and diabetes effect on kidney cortex (GSE20704) [cDNA Array] NIA Mouse 15K Custom Array (GPL3004) University of Arizona 2010-03-09 Mus musculus
Mus musculus
748,800
(31,200 x 24)
24 by_platform
by_series
17 Salmonella infected Dictyostelium discoideum (GSE20688) [cDNA Array] Dictyostelium discoideum cDNA Microarray 6000 (GPL1972) Institute for Biochemistry 1 2010-03-09 Dictyostelium discoideum
Dictyostelium discoideum
699,840
(15,552 x 45)
45 by_platform
by_series
18 Transcription profiling of Drosophila melanogaster SSDP target genes (GSE20074) [cDNA Array] Incyte Drosophila LifeArray v1.0 (GPL20) Tel-Aviv University 2010-01-27 Drosophila melanogaster
Drosophila melanogaster
692,208
(31,464 x 22)
22 by_platform
by_series
19 Expression profiling analysis of NOX4 mutant mouse model (GSE20400) [cDNA Array] GSF/IEG mouse 21K array (+RZPD) (GPL4937) Helmholtz Zentrum München, German Research Center for Environmental Health 2010-02-18 Mus musculus
Mus musculus
665,408
(20,794 x 32)
8 8 8 8 by_platform
by_series
20 Dll1 mice cloned by nuclear transfer (GSE20560) [cDNA Array] GSF/IEG mouse 21K array (+RZPD) (GPL4937) Helmholtz Zentrum München, German Research Center for Environmental Health 2010-03-01 Mus musculus
Mus musculus
665,408
(20,794 x 32)
16 16 by_platform
by_series
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