Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(102)		   Primates
(4)		   Rodents
(40)		   Mammals
(13)		   Vertebrates
(33)		   Invertebrates
(30)		   Plants
(75)		   Bacteria
(73)		   Viruses
(4)		   Phages
(0)		   Unclassified
(18)		   All
(392)		  
  SAGE NlaIII
(6)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(0)		   GeneChip
(20)		   Tiling Array
(27)		   cDNA Array
(57)		   Oligo Array
(216)		   Bead Array
(4)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(57)		   Other
(2)		   All
(392)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL10277 US Army ERDC Fathead minnow brain tissue cDNA 4K Microarray 4,128 US Army ERDC 2010-03-31 US Army ERDC Pimephales promelas
Pimephales promelas		 cDNA Array spotted DNA/cDNA, US Army ERDC Fathead minnow brain tissue cDNA 4K Microarray,
2 GPL9949 University of Groningen Bacillus cereus ATCC 14579 5k array (condensed) 5,167 university of Groningen 2010-01-20 University of Groningen Bacillus cereus ATCC 14579
Bacillus cereus ATCC 14579		 cDNA Array spotted DNA/cDNA, University of Groningen Bacillus cereus ATCC 14579 5k array (condensed), The Platform data table reflects a condensed representation of the array's replicate features.
3 GPL10244 Acropora palmata 2K EST array 2,051 University of North Carolina, Wilmington 2010-03-23 University of California, Merced Acropora palmata
Acropora palmata		 cDNA Array spotted DNA/cDNA, Acropora palmata 2K EST array,
4 GPL10016 UHN Mouse 22.4k mouse cDNA array 22,656 University of Pune 2010-02-05 University Health Network, Canada Microarray Centre Mus musculus
Mus musculus		 cDNA Array spotted DNA/cDNA, UHN Mouse 22.4k mouse cDNA array,
5 GPL10093 UHN Human 19K cDNA microarray 10,490 University Health Network 2010-02-22 University Health Network Microarray Centre, Toronto, Canada (www.microarrays.ca) Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, UHN Human 19K cDNA microarray,
6 GPL10117 UHN_human_single-spotted 19k cDNA array_version 8 8,829 The University of Queensland 2010-03-01 University Health Network Microarray Centre, Ontario Cancer Institute Toronto, Canada Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, UHN_human_single-spotted 19k cDNA array_version 8,
7 GPL9981 UofT KB1 19.2K v2 19,200 University of toronto 2010-01-26 University Health Network (UHN) Microarray Facility, Toronto, Ontario, www.microarrays.ca dechlorinating enrichment culture KB-1
dechlorinating enrichment culture KB-1		 cDNA Array spotted DNA/cDNA, UofT KB1 19.2K v2, KB1 mixed microbial consortium. Composition of community as estimated by 16S qPCR: Dehalococcoides:48.1-70.2% Chlorobi SJA-28:6-14.9% Acetobacterium:2.65-12% Sporomusa:1.2-11.45% Spirochaete SA-8 :2.8-8.3% Methanomicrobiales:3.5-5.8% OP5:2.5-5% Geobacter:3-4.4% Methanosarcina:0.1-1% Methanosaeta:0-0% Bacteroidales 1:0-0.8% Syntrophus:0-0.03% Syntrophobacter:0-0.2% Sulfurospirillum:0-0.002% Methanomethylvorans:0-0.04%
8 GPL10233 UHNMAC Homo sapiens SS-H19Kv9 19,200 Université de Sherbrooke 2010-03-19 University Health Network (UHN) Microarray Center, Toronto, Canada Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, UHNMAC Homo sapiens SS-H19Kv9, This set includes 19,200 cDNA clones from the IMAGE consortium. Single-spotted array containing 19,008 characterized and unknown human ESTs. The clone set has been sequence-verified at the Microarray Centre and the sequences can be downloaded for validation.
9 GPL9966 NRC-BRI human 19K cDNA spotted array 15,067 National Research Council of Canada 2010-01-22 University Health Network (Toronto, ON, Canada) Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, NRC-BRI human 19K cDNA spotted array, 19,008 genes/ESTs
10 GPL10174 UHN Homo sapiens 19.2K cDNA array 19,200 University of Pune 2010-03-13 UHN microarray centre Toronto Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, UHN Homo sapiens 19.2K cDNA array,
11 GPL9906 UCSF Mouse BAC 3K array 2,896 University of California at San Francisco 2010-01-13 UCSF Cancer Research Institute Mus musculus
Mus musculus		 cDNA Array spotted DNA/cDNA, UCSF Mouse BAC 3K array, The clones are ordered by position in the genome (UCSC draft genome sequence, May 2004 freeze) beginning at chromosome 1 and ending with chromosome X.
12 GPL9995 NHRI Human 46K cDNA array 46,609 National Health Research Institutes 2010-02-01 Taiwan, NHRI microarray facility Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, NHRI Human 46K cDNA array,
13 GPL10078 SMD Print_1566 Homo sapiens 49,152 Stanford University 2010-02-19 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_1566 Homo sapiens,
14 GPL9872 SMD Print_1447 Homo sapiens 44,544 Stanford 2010-01-10 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_1447 Homo sapiens,
15 GPL9873 SMD Print_1524 Homo sapiens 44,544 Stanford 2010-01-10 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_1524 Homo sapiens,
16 GPL10052 SMD Print_982 Mus musculus 43,008 Stanford Microarray Database (SMD) 2010-02-16 Stanford Functional Genomics Facility, Stanford School of Medicine Mus musculus
Mus musculus		 cDNA Array spotted DNA/cDNA, SMD Print_982 Mus musculus,
17 GPL10054 SMD Print_1214 Homo sapiens 43,008 Stanford Microarray Database (SMD) 2010-02-16 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_1214 Homo sapiens,
18 GPL10105 SMD Print_996 Homo sapiens 41,472 University of Ulm 2010-02-25 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_996 Homo sapiens,
19 GPL10106 SMD Print_1009 Homo sapiens 41,472 University of Ulm 2010-02-25 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_1009 Homo sapiens,
20 GPL10107 SMD Print_1094 Homo sapiens 41,472 University of Ulm 2010-02-25 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SMD Print_1094 Homo sapiens,
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