Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(1,679)
  Primates
(3)
  Rodents
(919)
  Mammals
(72)
  Vertebrates
(45)
  Invertebrates
(143)
  Plants
(416)
  Bacteria
(236)
  Viruses
(9)
  Phages
(0)
  Unclassified
(54)
  All
(3,579)
 
  SAGE NlaIII
(8)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(5)
  GeneChip
(1,285)
  Tiling Array
(423)
  cDNA Array
(440)
  Oligo Array
(796)
  Bead Array
(263)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(24)
  HT-Seq
(280)
  Other
(55)
  All
(3,579)
 
1   |   2   |   3   |   4   |   5      »      [22]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Maize primary roots: inbred lines vs. hybrids (GSE10539) [cDNA Array] Maize cDNA Generation II Version B (GPL1996) University of Bonn 2008-02-15 Zea mays
Zea mays
2,042,880
(12,160 x 168)
168 by_platform
by_series
2 Heterosis-associated gene expression in maize (Zea mays L.) embryo and endosperm 6 days after pollination (GSE17821) [cDNA Array] UniHH/Scholten_zea mays_heterosis 3k-array (GPL9103) University of Hamburg 2009-08-26 Zea mays
Zea mays
172,464
(3,593 x 48)
48 by_platform
by_series
3 Xylella fastidiosa Study on different growth media (GSE13748) [cDNA Array] UNESP Xylella fastidiosa array version 1 (GPL7554) Max-Delbruck Center for Molecular Medicine 2008-11-26 Xylella fastidiosa
Xylella fastidiosa
1,479
(493 x 3)
3 by_platform
by_series
4 Sensitivity and linear dynamic range of miRNA detection (GSE15834) [cDNA Array] miRXploreTM microarrays (856) (GPL8440) Miltenyi Biotec GmbH 2009-04-27 synthetic construct
synthetic construct
12,798
(1,422 x 9)
9 by_platform
by_series
5 Transcriptome analysis of the eukaryotic-type ser/thr kinase PknB in Staphylococcus aureus (GSE15346) [cDNA Array] sciTracer Staphylococcus aureus N315 Scienion2004 (GPL5429) University of Wuerzburg 2009-03-23 Staphylococcus aureus subsp. aureus NCTC 8325
Staphylococcus aureus subsp. aureus NCTC 8325
34,560
(6,912 x 5)
5 by_platform
by_series
6 Staphylococcus aureus REX mutant (GSE17128) [cDNA Array] sciTracer Staphylococcus aureus 2005 (GPL8823) University of Muenster 2009-07-15 Staphylococcus aureus
Staphylococcus aureus
69,120
(6,912 x 10)
10 by_platform
by_series
7 Transcriptional profiles of Staphylococcus aureus strains in the presence of the lantibiotic mersacidin. (GSE9261) [cDNA Array] sciTracer Staphylococcus aureus N315 Scienion2005 (GPL5421) University of Bonn 2007-10-08 Staphylococcus aureus
Staphylococcus aureus
69,120
(6,912 x 10)
10 by_platform
by_series
8 Comparison of the transcriptional profiles of intermediately vancomycin resistant and susceptible S. aureus strains (GSE10529) [cDNA Array] sciTracer_Staphylococcus_aureus_N315_Scienion2002 (GPL5431) University of Bonn 2008-02-14 Staphylococcus aureus
Staphylococcus aureus
41,472
(6,912 x 6)
6 by_platform
by_series
9 Transcriptional profiles of Staphylococcus aureus strains in the presence of the lantibiotic mersacidin. (GSE9261) [cDNA Array] sciTracer Staphylococcus aureus N315 Scienion2004 (GPL5429) University of Bonn 2007-10-08 Staphylococcus aureus
Staphylococcus aureus
27,648
(6,912 x 4)
4 by_platform
by_series
10 Comparison of the transcriptional profiles of intermediately vancomycin resistant and susceptible S. aureus strains (GSE10529) [cDNA Array] sciTracer Staphylococcus aureus N315 Scienion2005 (GPL5421) University of Bonn 2008-02-14 Staphylococcus aureus
Staphylococcus aureus
13,824
(6,912 x 2)
2 by_platform
by_series
11 Comparative transcriptome analysis of two S. aureus strains with different susceptibilities to mersacidin. (GSE12016) [cDNA Array] sciTracer Staphylococcus aureus N315 Scienion2005 (GPL5421) University of Bonn 2008-07-07 Staphylococcus aureus
Staphylococcus aureus
13,824
(6,912 x 2)
2 by_platform
by_series
12 The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair (GSE34851) [cDNA Array] IFR_Salmonella_7.3k_v1.0 (GPL5780) IMIB Würzburg 2012-01-04 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
43,776
(7,296 x 6)
6 by_platform
by_series
13 Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA (GSE35848) [cDNA Array] IFR_Salmonella_7.3k_v1.0 (GPL5780) IMIB Würzburg 2012-02-15 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
43,776
(7,296 x 6)
6 by_platform
by_series
14 Comparison between a first and a last run of industrial serial repitching (GSE45950) [cDNA Array] Eurogentec L090D Yeast ORFs (GPL2603) Universität Hannover 2013-04-10 Saccharomyces cerevisiae
Saccharomyces cerevisiae
102,400
(12,800 x 8)
8 by_platform
by_series
15 Serial industrial repitching and stress (GSE45951) [cDNA Array] Eurogentec L090D Yeast ORFs (GPL2603) Universität Hannover 2013-04-10 Saccharomyces cerevisiae
Saccharomyces cerevisiae
102,400
(12,800 x 8)
8 by_platform
by_series
16 Low-level MMS treatment of S.cerevisiae (GSE8237) [cDNA Array] Complementary DNA arrays produced with PCR fragments of 6116 ORFs of Saccharomyces cerevisiae (GPL5398) Institute for Pharmacy and Molecular Biotechnology 2007-06-22 Saccharomyces cerevisiae
Saccharomyces cerevisiae
87,178
(6,227 x 14)
14 by_platform
by_series
17 Quality control of spliced mRNAs requires the shuttling SR-proteins Gbp2 and Hrb1 (GSE52808) [cDNA Array] UHN Yeast 6.4k v6 (GPL10165) University Medical Center Göttingen 2013-11-27 Saccharomyces cerevisiae
Saccharomyces cerevisiae
37,770
(6,295 x 6)
6 by_platform
by_series
18 The kinetics of transcriptomic changes induced by cigarette smoke in rat lungs (GSE4644) [cDNA Array] PIQOR 6k rat set1 (GPL3607) Miltenyi Biotec GmbH 2006-04-10 Rattus norvegicus
Rattus norvegicus
215,892
(11,994 x 18)
18 by_platform
by_series
19 Gene expression profiling in rat renal allografts after prolonged cold ischemia (GSE4441) [cDNA Array] PIQOR Custom Ischemia (GPL3540) Miltenyi Biotec GmbH 2006-03-10 Rattus norvegicus
Rattus norvegicus
29,480
(2,948 x 10)
10 by_platform
by_series
20 A rat toxicogenomics study with Calcium Sensitizer EMD 82571 reveals a pleiotropic cause in teratogenicity (GSE54121) [cDNA Array] Rat teratogenicity custom array (GPL18176) Hannover Medical School 2014-01-15 Rattus norvegicus
Rattus norvegicus
8,364
(246 x 34)
6 20 8 by_platform
by_series
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