Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,851)		   Primates
(60)		   Rodents
(2,590)		   Mammals
(41)		   Vertebrates
(39)		   Invertebrates
(59)		   Plants
(464)		   Bacteria
(78)		   Viruses
(0)		   Phages
(0)		   Unclassified
(120)		   All
(6,302)		  
  SAGE NlaIII
(24)		   SAGE RsaI
(0)		   SAGE Sau3A
(5)		   MPSS
(32)		   GeneChip
(2,621)		   Tiling Array
(155)		   cDNA Array
(1,964)		   Oligo Array
(1,212)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(9)		   RT-PCR
(15)		   HT-Seq
(0)		   Other
(265)		   All
(6,302)		  
  brain
(217)		   blood
(191)		   connective
(26)		   reproductive
(34)		   muscular
(59)		   digestive
(34)		   liver
(301)		   lung
(128)		   urinary
(217)		   endo/exo-crine
(40)		   embryo
(2)		   adult aerial structure
(15)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(421)		   unclassified
(279)		   all
(1,964)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM37996 yellow experiment 4 896 Facultad de Farmacia (UCM) 2004-12-22 [cDNA Array] Cell Wall Chip cwchv02 (GPL1433) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 Strain (Control mRNA: no treatment) title:yellow experiment 4 description:S. cerevisiae was grown on YEPD. For yellow experiments, yeast cells were grown overnight at 24 °C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 °C for 6h. At this time cells were collected. Experiment was carried out hybridising the cDNA from the same RNA (from this culture) with both Cy3 and Cy5
2 GSM37995 yellow experiment 3 896 Facultad de Farmacia (UCM) 2004-12-22 [cDNA Array] Cell Wall Chip cwchv02 (GPL1433) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 Strain (Control mRNA: no treatment) title:yellow experiment 3 description:S. cerevisiae was grown on YEPD. For yellow experiments, yeast cells were grown overnight at 24 °C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 °C for 6h. At this time cells were collected. Experiment was carried out hybridising the cDNA from the same RNA (from this culture) with both Cy3 and Cy5
3 GSM37994 yellow experiment 2 896 Facultad de Farmacia (UCM) 2004-12-22 [cDNA Array] Cell Wall Chip cwchv02 (GPL1433) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 Strain (Control mRNA: no treatment) title:yellow experiment 2 description:S. cerevisiae was grown on YEPD. For yellow experiments, yeast cells were grown overnight at 24 °C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 °C for 6h. At this time cells were collected. Experiment was carried out hybridising the cDNA from the same RNA (from this culture) with both Cy3 and Cy5
4 GSM37993 yellow experiment 1 896 Facultad de Farmacia (UCM) 2004-12-22 [cDNA Array] Cell Wall Chip cwchv02 (GPL1433) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 Strain (Control mRNA: no treatment) title:yellow experiment 1 description:S. cerevisiae was grown on YEPD. For yellow experiments, yeast cells were grown overnight at 24 °C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 °C for 6h. At this time cells were collected. Experiment was carried out hybridising the cDNA from the same RNA (from this culture) with both Cy3 and Cy5
5 GSM34650 WKY-9week vs. SHR-9week (Array 4) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.2 (GPL1693) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a hypertensive stage (9 weeks of age).
6 GSM34648 WKY-9week vs. SHR-9week (Array 3) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.2 (GPL1693) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a hypertensive stage (9 weeks of age).
7 GSM34647 WKY-9week vs. SHR-9week (Array 2) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.2 (GPL1693) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a hypertensive stage (9 weeks of age).
8 GSM34646 WKY-9week vs. SHR-9week (Array 1) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.1 (GPL1692) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a hypertensive stage (9 weeks of age).
9 GSM34663 WKY-3week vs. WKY-9week (Array 4) 7,200 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v3.0 (GPL1344) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:SR: WKY-9week (Cy5) SG: WKY-3week (Cy3) title:WKY-3week vs. WKY-9week (Array 4) description:Age-related gene expression profile of Wistar-Kyoto (WKY) control rats between a pre-hypertensive stage (3 weeks of age) and a hypertensive stage (9 weeks of age).
10 GSM34662 WKY-3week vs. WKY-9week (Array 3) 7,200 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v3.0 (GPL1344) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:SR: WKY-9week (Cy5) SG: WKY-3week (Cy3) title:WKY-3week vs. WKY-9week (Array 3) description:Age-related gene expression profile of Wistar-Kyoto (WKY) control rats between a pre-hypertensive stage (3 weeks of age) and a hypertensive stage (9 weeks of age).
11 GSM34661 WKY-3week vs. WKY-9week (Array 2) 7,200 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v3.0 (GPL1344) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:SR: WKY-9week (Cy3) SG: WKY-3week (Cy5) title:WKY-3week vs. WKY-9week (Array 2) description:Age-related gene expression profile of Wistar-Kyoto (WKY) control rats between a pre-hypertensive stage (3 weeks of age) and a hypertensive stage (9 weeks of age).
12 GSM34660 WKY-3week vs. WKY-9week (Array 1) 7,200 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v3.0 (GPL1344) RNA Rattus norvegicus
Rattus norvegicus		 unclassified source_name:SR: WKY-9week (Cy3) SG: WKY-3week (Cy5) title:WKY-3week vs. WKY-9week (Array 1) description:Age-related gene expression profile of Wistar-Kyoto (WKY) control rats between a pre-hypertensive stage (3 weeks of age) and a hypertensive stage (9 weeks of age).
13 GSM34659 WKY-3week vs. SHR-3week (Array 4) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.1 (GPL1692) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a pre-hypertensive stage (3 weeks of age).
14 GSM34658 WKY-3week vs. SHR-3week (Array 3) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.1 (GPL1692) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a pre-hypertensive stage (3 weeks of age).
15 GSM34657 WKY-3week vs. SHR-3week (Array 2) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.1 (GPL1692) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a pre-hypertensive stage (3 weeks of age).
16 GSM34653 WKY-3week vs. SHR-3week (Array 1) 6,960 NIEHS 2004-11-04 [cDNA Array] NIEHS Rat Chip v2.1 (GPL1692) RNA Rattus norvegicus
Rattus norvegicus		 kidney Renal gene expression profile between spontaneously-hypertensive rats (SHR) and Wistar-Kyoto (WKY) control rats at a pre-hypertensive stage (3 weeks of age).
17 GSM35028 wildtype neonatal mouse heart4 (W-4) 28,704 Albert Einstein College of Medicine 2004-11-11 [cDNA Array] AECOM Mouse 27k cDNA array (GPL1698) RNA Mus musculus
Mus musculus		 pooled pool of ten adult mouse tissues (aorta, brain, heart, kidney, liver, lung, ovary/testicles, spleen, stomach) wildtype neonatal mouse heart4 (W-4)
18 GSM35027 wildtype neonatal mouse heart3 (W-3) 28,704 Albert Einstein College of Medicine 2004-11-11 [cDNA Array] AECOM Mouse 27k cDNA array (GPL1698) RNA Mus musculus
Mus musculus		 pooled pool of ten adult mouse tissues (aorta, brain, heart, kidney, liver, lung, ovary/testicles, spleen, stomach) wildtype neonatal mouse heart3 (W-3)
19 GSM35026 wildtype neonatal mouse heart2 (W-2) 28,704 Albert Einstein College of Medicine 2004-11-11 [cDNA Array] AECOM Mouse 27k cDNA array (GPL1698) RNA Mus musculus
Mus musculus		 pooled pool of ten adult mouse tissues (aorta, brain, heart, kidney, liver, lung, ovary/testicles, spleen, stomach) wildtype neonatal mouse heart2 (W-2)
20 GSM35025 wildtype neonatal mouse heart1 (W-1) 28,704 Albert Einstein College of Medicine 2004-11-11 [cDNA Array] AECOM Mouse 27k cDNA array (GPL1698) RNA Mus musculus
Mus musculus		 pooled pool of ten adult mouse tissues (aorta, brain, heart, kidney, liver, lung, ovary/testicles, spleen, stomach) wildtype neonatal mouse heart1 (W-1)
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