Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(33,111)
  Primates
(98)
  Rodents
(9,959)
  Mammals
(839)
  Vertebrates
(3,772)
  Invertebrates
(6,275)
  Plants
(5,495)
  Bacteria
(1,430)
  Viruses
(23)
  Phages
(45)
  Unclassified
(231)
  All
(61,532)
 
  SAGE NlaIII
(417)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(24)
  GeneChip
(25,502)
  Tiling Array
(4,789)
  cDNA Array
(6,600)
  Oligo Array
(13,576)
  Bead Array
(6,935)
  Protein Array
(0)
  Antibody
(1)
  RT-PCR
(493)
  HT-Seq
(2,920)
  Other
(268)
  All
(61,532)
 
  brain
(322)
  blood
(811)
  connective
(82)
  reproductive
(135)
  muscular
(326)
  digestive
(103)
  liver
(437)
  lung
(487)
  urinary
(187)
  endo/exo-crine
(84)
  embryo
(115)
  adult aerial structure
(456)
  young aerial structure
(43)
  root
(0)
  meristem/growing tissue
(20)
  flower/sexual organ
(52)
  seed/fruit/grain
(74)
  pooled
(816)
  unclassified
(2,050)
  all
(6,600)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM44750 Brain - 2 21,939 Best Institute 2005-03-05 [cDNA Array] Mouse QRNA prediction array (GPL1896) RNA Mus musculus
Mus musculus
cerebrum Brain - 2
2 GSM365018 slide 9 - Hyp SKF 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline (control) or SKF 38393 40 ug/g in 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #9
3 GSM365019 slide 19 - Hyp SKF 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline (control) or SKF 38393 40 ug/g in 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #19
4 GSM365020 slide 33 - Hyp SKF 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline (control) or SKF 38393 40 ug/g in 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #33
5 GSM365021 slide 44 - Hyp SKF 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline (control) or SKF 38393 40 ug/g in 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #44; dye-swap of slide #19
6 GSM365030 slide 8 - Tel Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #8
7 GSM365031 slide 16 - Tel Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #16; dye-swap of slide #24
8 GSM365032 slide 24 - Tel Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #24
9 GSM365033 slide 40 - Tel Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #40
10 GSM365034 slide 26 - Hyp Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #26
11 GSM365035 slide 14 - Hyp Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #14
12 GSM365036 slide 11 - Hyp Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #11
13 GSM365037 slide 5 - Hyp Quin 19,200 University of Ottawa 2009-01-27 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature female goldfish received 2 injections at 5 uL/g body weight: 1) 0.1% DMSO and 0.6% saline, and; 2) 0.6% saline (control) or quinpirole (LY 171555) 2 ug/g in 0.6% saline Animals were anaesthetized in MS222, and hypothalamus tissues were harvested for RNA extraction, cDNA synthesis and microarray analysis. Slide #5; dye-swap of slide #11
14 GSM401480 slide 4 - Hyp MPTP + aMPT 19,200 University of Ottawa 2009-05-11 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature (mid-May) adult female goldfish received a single injection of MPTP (50 ug/g body weight at 5 uL/g body weight) or 0.6% saline on day 0 and a single injection of alpha-MPT (240 ug/g body weight at 5 uL/g body weight) or 0.6% saline on Day 5. Hypothalamus tissue was extracted on Day 6.
15 GSM401481 slide 17 - Hyp MPTP + aMPT 19,200 University of Ottawa 2009-05-11 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature (mid-May) adult female goldfish received a single injection of MPTP (50 ug/g body weight at 5 uL/g body weight) or 0.6% saline on day 0 and a single injection of alpha-MPT (240 ug/g body weight at 5 uL/g body weight) or 0.6% saline on Day 5. Hypothalamus tissue was extracted on Day 6.
16 GSM401482 slide 52 - Hyp MPTP + aMPT 19,200 University of Ottawa 2009-05-11 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature (mid-May) adult female goldfish received a single injection of MPTP (50 ug/g body weight at 5 uL/g body weight) or 0.6% saline on day 0 and a single injection of alpha-MPT (240 ug/g body weight at 5 uL/g body weight) or 0.6% saline on Day 5. Hypothalamus tissue was extracted on Day 6.
17 GSM401483 slide 21 - Hyp MPTP + aMPT (dye swap) 19,200 University of Ottawa 2009-05-11 [cDNA Array] AURATUS: The goldfish environmental genomics project v1.0 (GPL3735) RNA Carassius auratus
Carassius auratus
cerebrum Sexually mature (mid-May) adult female goldfish received a single injection of MPTP (50 ug/g body weight at 5 uL/g body weight) or 0.6% saline on day 0 and a single injection of alpha-MPT (240 ug/g body weight at 5 uL/g body weight) or 0.6% saline on Day 5. Hypothalamus tissue was extracted on Day 6.
18 GSM1027374 Gene Expression in Forebrain of Male Goldfish Following Exposure to Waterborne Sex Pheromones Replicate 1 16,482 University of Ottawa 2012-10-29 [cDNA Array] AURATUS: The goldfish environmental genomics project 17K array v1.1 (GPL7056) RNA Carassius auratus
Carassius auratus
cerebrum Gene Expression in Forebrain of Male Goldfish Following Exposure to Waterborne Sex Pheromones Replicate 1
19 GSM1027375 Gene Expression in Forebrain of Male Goldfish Following Exposure to Waterborne Sex Pheromones Replicate 2 16,482 University of Ottawa 2012-10-29 [cDNA Array] AURATUS: The goldfish environmental genomics project 17K array v1.1 (GPL7056) RNA Carassius auratus
Carassius auratus
cerebrum Gene Expression in Forebrain of Male Goldfish Following Exposure to Waterborne Sex Pheromones Replicate 2
20 GSM1027376 Gene Expression in Forebrain of Male Goldfish Following Exposure to Waterborne Sex Pheromones Replicate 3 16,482 University of Ottawa 2012-10-29 [cDNA Array] AURATUS: The goldfish environmental genomics project 17K array v1.1 (GPL7056) RNA Carassius auratus
Carassius auratus
cerebrum Gene Expression in Forebrain of Male Goldfish Following Exposure to Waterborne Sex Pheromones Replicate 3
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