Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(33,137)
  Primates
(196)
  Rodents
(10,648)
  Mammals
(1,806)
  Vertebrates
(771)
  Invertebrates
(1,113)
  Plants
(7,693)
  Bacteria
(2,917)
  Viruses
(10)
  Phages
(0)
  Unclassified
(511)
  All
(58,828)
 
  SAGE NlaIII
(19)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(68)
  GeneChip
(24,200)
  Tiling Array
(868)
  cDNA Array
(7,370)
  Oligo Array
(14,147)
  Bead Array
(9,468)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(372)
  HT-Seq
(1,870)
  Other
(446)
  All
(58,828)
 
  brain
(590)
  blood
(1,628)
  connective
(205)
  reproductive
(68)
  muscular
(167)
  digestive
(208)
  liver
(216)
  lung
(60)
  urinary
(438)
  endo/exo-crine
(238)
  embryo
(153)
  adult aerial structure
(169)
  young aerial structure
(0)
  root
(208)
  meristem/growing tissue
(72)
  flower/sexual organ
(0)
  seed/fruit/grain
(48)
  pooled
(223)
  unclassified
(2,679)
  all
(7,370)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM275596 210504 K1 1,185 University of Giessen 2008-03-18 [cDNA Array] Atlas Human Cancer 1.2 Array (Cat. #7851-1) (GPL131) RNA Homo sapiens
Homo sapiens
thyroid/parathyroid 210504 K1
2 GSM275600 220604 K1 1,185 University of Giessen 2008-03-18 [cDNA Array] Atlas Human Cancer 1.2 Array (Cat. #7851-1) (GPL131) RNA Homo sapiens
Homo sapiens
thyroid/parathyroid 220604 K1
3 GSM152556 Joosse 2007: SKBR3 CGH profile - 10% dextran sulphate, hybridization temperature of 37°C 3,277 University Medical Center Hamburg-Eppendorf 2006-12-22 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
4 GSM152557 Joosse 2007: SKBR3 CGH profile - 10% dextran sulphate, hybridization temperature of 42°C 3,277 University Medical Center Hamburg-Eppendorf 2006-12-22 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
5 GSM152558 Joosse 2007: SKBR3 CGH profile - 15% dextran sulphate, hybridization temperature of 37°C 3,277 University Medical Center Hamburg-Eppendorf 2006-12-22 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
6 GSM152559 Joosse 2007: SKBR3 CGH profile - 15% dextran sulphate, hybridization temperature of 42°C 3,277 University Medical Center Hamburg-Eppendorf 2006-12-22 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
7 GSM154096 Joosse 2007: SKBR3 CGH profile - 15% 5kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
8 GSM154097 Joosse 2007: SKBR3 CGH profile - 17.5% 5kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
9 GSM154098 Joosse 2007: SKBR3 CGH profile - 20% 5kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
10 GSM154099 Joosse 2007: SKBR3 CGH profile - 15% 10kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
11 GSM154100 Joosse 2007: SKBR3 CGH profile - 17.5% 10kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
12 GSM154101 Joosse 2007: SKBR3 CGH profile - 20% 10kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
13 GSM154102 Joosse 2007: SKBR3 CGH profile - 15% 50kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
14 GSM154104 Joosse 2007: SKBR3 CGH profile - 17.5% 50kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
15 GSM154107 Joosse 2007: SKBR3 CGH profile - 20% 50kDa dextran sulphate 3,277 University Medical Center Hamburg-Eppendorf 2007-01-05 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
16 GSM170624 Joosse 2007: SKBR3 - automated hybridization - experiment 1 3,277 University Medical Center Hamburg-Eppendorf 2007-02-21 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
17 GSM170625 Joosse 2007: SKBR3 - automated hybridization - experiment 2 3,277 University Medical Center Hamburg-Eppendorf 2007-02-21 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
18 GSM170626 Joosse 2007: FFPE SKBR3 - automated hybridization 3,277 University Medical Center Hamburg-Eppendorf 2007-02-21 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
19 GSM170627 Joosse 2007: SKBR3 - manual hybridization 3,277 University Medical Center Hamburg-Eppendorf 2007-02-21 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
20 GSM170630 Joosse 2007: SKBR3 - hybridized at 37C for 72 hours 3,277 University Medical Center Hamburg-Eppendorf 2007-02-21 [cDNA Array] Netherlands Cancer Institute human 3.5k BAC array (GPL4560) genomic Homo sapiens
Homo sapiens
breast SKBR3 cell-line Women reference pool
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