Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(1,683)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(439)
  GeneChip
(377,145)
  Tiling Array
(21,846)
  cDNA Array
(103,476)
  Oligo Array
(239,584)
  Bead Array
(106,999)
  Protein Array
(5)
  Antibody
(1,152)
  RT-PCR
(3,959)
  HT-Seq
(35,574)
  Other
(6,909)
  All
(898,944)
 
  brain
(5,158)
  blood
(12,319)
  connective
(4,210)
  reproductive
(4,227)
  muscular
(2,279)
  digestive
(4,177)
  liver
(4,479)
  lung
(3,064)
  urinary
(2,306)
  endo/exo-crine
(4,767)
  embryo
(1,764)
  adult aerial structure
(2,637)
  young aerial structure
(921)
  root
(1,502)
  meristem/growing tissue
(294)
  flower/sexual organ
(436)
  seed/fruit/grain
(643)
  pooled
(6,706)
  unclassified
(41,587)
  all
(103,476)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM110556 Lung, RNA batch 1, Lung tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica
lung Lung, Lung tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
2 GSM110583 Lung, RNA batch 2, Lung tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica
lung Lung, Lung tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
3 GSM328803 Lung_healthy_control_Animal-20 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_healthy_control_Animal-20 Reference, pool of equal amount of total-RNA from all samples
4 GSM328804 Lung_infected_necrotic-area_Animal-32 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_necrotic-area_Animal-32 Reference, pool of equal amount of total-RNA from all samples
5 GSM328805 Lung_healthy_control_Animal-23 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_healthy_control_Animal-23 Reference, pool of equal amount of total-RNA from all samples
6 GSM328806 Lung_infected_demarcation-zone_Animal-36 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_demarcation-zone_Animal-36 Reference, pool of equal amount of total-RNA from all samples
7 GSM328807 Lung_infected_visually-unaffected-area_Animal-36 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_visually-unaffected-area_Animal-36 Reference, pool of equal amount of total-RNA from all samples
8 GSM328808 Lung_infected_demarcation-zone_Animal-30 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_demarcation-zone_Animal-30 Reference, pool of equal amount of total-RNA from all samples
9 GSM328809 Lung_infected_demarcation-zone_Animal-26 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_demarcation-zone_Animal-26 Reference, pool of equal amount of total-RNA from all samples
10 GSM328810 Lung_infected_visually-unaffected-area_Animal-32 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_visually-unaffected-area_Animal-32 Reference, pool of equal amount of total-RNA from all samples
11 GSM328811 Lung_infected_necrotic-area_Animal-28 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_necrotic-area_Animal-28 Reference, pool of equal amount of total-RNA from all samples
12 GSM328812 Lung_infected_visually-unaffected-area_Animal-27 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_visually-unaffected-area_Animal-27 Reference, pool of equal amount of total-RNA from all samples
13 GSM328813 Lung_infected_demarcation-zone_Animal-28 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_demarcation-zone_Animal-28 Reference, pool of equal amount of total-RNA from all samples
14 GSM328814 Lung_infected_necrotic-area_Animal-26 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_necrotic-area_Animal-26 Reference, pool of equal amount of total-RNA from all samples
15 GSM328815 Lung_infected_visually-unaffected-area_Animal-33 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_visually-unaffected-area_Animal-33 Reference, pool of equal amount of total-RNA from all samples
16 GSM328816 Lung_healthy_control_Animal-21 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_healthy_control_Animal-21 Reference, pool of equal amount of total-RNA from all samples
17 GSM328817 Lung_infected_necrotic-area_Animal-33 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_necrotic-area_Animal-33 Reference, pool of equal amount of total-RNA from all samples
18 GSM328818 Lung_healthy_control_Animal-24 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_healthy_control_Animal-24 Reference, pool of equal amount of total-RNA from all samples
19 GSM328819 Lung_infected_demarcation-zone_Animal-33 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_demarcation-zone_Animal-33 Reference, pool of equal amount of total-RNA from all samples
20 GSM328820 Lung_infected_demarcation-zone_Animal-31 55,488 Aarhus University, Faculty of Agricultural Sciences 2008-10-09 [cDNA Array] DJF Pig 55K v1 (GPL6173) RNA Sus scrofa
Sus scrofa domestica
lung Lung_infected_demarcation-zone_Animal-31 Reference, pool of equal amount of total-RNA from all samples
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