Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(5,158)		   blood
(12,319)		   connective
(4,210)		   reproductive
(4,227)		   muscular
(2,279)		   digestive
(4,177)		   liver
(4,479)		   lung
(3,064)		   urinary
(2,306)		   endo/exo-crine
(4,767)		   embryo
(1,764)		   adult aerial structure
(2,637)		   young aerial structure
(921)		   root
(1,502)		   meristem/growing tissue
(294)		   flower/sexual organ
(436)		   seed/fruit/grain
(643)		   pooled
(6,706)		   unclassified
(41,587)		   all
(103,476)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM984853 Bambusa_oldhamii_100c 1,176 National Taiwan University 2012-08-14 [cDNA Array] NTU Bambusa oldhamii spotted array (GPL15916) RNA Bambusa oldhamii
Bambusa oldhamii		 meristem/growing tissue the middle region of etiolated shoots the top region of green shoots
2 GSM984852 Bambusa_oldhamii_100b 1,176 National Taiwan University 2012-08-14 [cDNA Array] NTU Bambusa oldhamii spotted array (GPL15916) RNA Bambusa oldhamii
Bambusa oldhamii		 meristem/growing tissue the middle region of etiolated shoots the middle region of green shoots
3 GSM984851 Bambusa_oldhamii_100a 1,176 National Taiwan University 2012-08-14 [cDNA Array] NTU Bambusa oldhamii spotted array (GPL15916) RNA Bambusa oldhamii
Bambusa oldhamii		 meristem/growing tissue the middle region of etiolated shoots the culm base of green shoots
4 GSM984850 Bambusa_oldhamii_wa 1,176 National Taiwan University 2012-08-14 [cDNA Array] NTU Bambusa oldhamii spotted array (GPL15916) RNA Bambusa oldhamii
Bambusa oldhamii		 meristem/growing tissue the middle region of etiolated shoots the culm base of etiolated shoots
5 GSM984849 Bambusa_oldhamii_wc 1,176 National Taiwan University 2012-08-14 [cDNA Array] NTU Bambusa oldhamii spotted array (GPL15916) RNA Bambusa oldhamii
Bambusa oldhamii		 meristem/growing tissue the middle region of etiolated shoots the top region of etiolated shoots
6 GSM899004 13968868 - A2 rep2 vs H1 rep2 34,647 INRA 2012-03-22 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
7 GSM899003 13968869 - H1 rep2 vs A2 rep2 34,647 INRA 2012-03-22 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
8 GSM899002 13968866 - A2 rep1 vs H1 rep1 34,642 INRA 2012-03-22 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
9 GSM899001 13968867 - H1 rep1 vs A2 rep1 34,647 INRA 2012-03-22 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
10 GSM898122 13968872 - SG1 175.4 repet2 vs SG1 175.1 repet2 34,647 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
11 GSM898121 13968874 - SG1 175.1 repet2 vs SG1 175.4 repet2 34,647 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
12 GSM898120 13968870 - SG1 175.4 repet1 vs SG1 175.1 repet1 34,646 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
13 GSM898119 13968871 - SG1 175.1 repet1 vs SG1 175.4 repet1 34,646 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
14 GSM898118 13968865 - SG3 97.1 repet2 vs SG3 97.4 repet2 34,640 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
15 GSM898117 13968864 - SG3 97.4 repet2 vs SG3 97.1 repet2 34,641 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
16 GSM898116 13968862 - SG3 97.4 repet1 vs SG3 97.1 repet1 34,645 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
17 GSM898115 13968863 - SG3 97.1 repet1 vs SG3 97.4 repet1 34,647 INRA 2012-03-21 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue What are the transcriptional consequences of the allelic contrast at SG3, SG1 and EGO3 loci mapped for its effect on shoot growth and identified at the gene level
18 GSM770810 14178687 - 2c- vs 2c+ 34,095 INRA 2011-08-02 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue Identify genes induced (or repressed) in the root tips of Arabidopsis thaliana during phosphate deficiency (Pi) (15 to 60 minutes).
19 GSM770809 14178686 - 2c+ vs 2c- 34,084 INRA 2011-08-02 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue Identify genes induced (or repressed) in the root tips of Arabidopsis thaliana during phosphate deficiency (Pi) (15 to 60 minutes).
20 GSM770808 14178685 - 1c- vs 1c+ 34,093 INRA 2011-08-02 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 meristem/growing tissue Identify genes induced (or repressed) in the root tips of Arabidopsis thaliana during phosphate deficiency (Pi) (15 to 60 minutes).
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