Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(5,158)		   blood
(12,319)		   connective
(4,210)		   reproductive
(4,227)		   muscular
(2,279)		   digestive
(4,177)		   liver
(4,479)		   lung
(3,064)		   urinary
(2,306)		   endo/exo-crine
(4,767)		   embryo
(1,764)		   adult aerial structure
(2,637)		   young aerial structure
(921)		   root
(1,502)		   meristem/growing tissue
(294)		   flower/sexual organ
(436)		   seed/fruit/grain
(643)		   pooled
(6,706)		   unclassified
(41,587)		   all
(103,476)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM472259 13968522 - wat1.1 root 3 vs Col0 root 3 34,647 INRA 2009-11-18 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Col0 root 3 wat1.1 root 3
2 GSM472253 13968520 - wat1.1 root 1 vs Col0 root 1 34,645 INRA 2009-11-18 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Col0 root 1 wat1.1 root 1
3 GSM472252 13968004 - Col0 root 1 vs wat1.1 root 1 34,644 INRA 2009-11-18 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root wat1.1 root 1 Col0 root 1
4 GSM973424 14286616 - 4days 1G R1 vs 4days microgravity R1 34,640 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
5 GSM973430 14286623 - 8days 1G R2 vs 8days microgravity R2 34,640 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
6 GSM472257 13968521 - wat1.1 root 2 vs Col0 root 2 34,639 INRA 2009-11-18 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Col0 root 2 wat1.1 root 2
7 GSM472256 13968008 - Col0 root 2 vs wat1.1 root 2 34,637 INRA 2009-11-18 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root wat1.1 root 2 Col0 root 2
8 GSM472258 13968010 - Col0 root 3 vs wat1.1 root 3 34,637 INRA 2009-11-18 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root wat1.1 root 3 Col0 root 3
9 GSM973422 14286614 - 12days 1G R2 vs 12days microgravity R2 34,637 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
10 GSM973426 14286619 - 4days 1G R2 vs 4days microgravity R2 34,637 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
11 GSM973433 14286626 - 12days microgravity R1 vs 12days 1G R1 34,632 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
12 GSM973425 14286617 - 4days microgravity R1 vs 4days 1G R1 34,631 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
13 GSM973428 14286621 - 8days 1G R1 vs 8days microgravity R1 34,629 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
14 GSM973423 14286615 - 12days microgravity R2 vs 12days 1G R2 34,624 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
15 GSM973431 14286624 - 8days microgravity R2 vs 8days 1G R2 34,624 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
16 GSM973427 14286620 - 4days microgravity R2 vs 4days 1G R2 34,622 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
17 GSM973429 14286622 - 8days microgravity R1 vs 8days 1G R1 34,622 INRA 2012-07-25 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Action of microgravity on root development
18 GSM601357 13969355 - Untreated-Root Repeat2 vs Worm-Root Repeat2 34,620 INRA 2010-09-28 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Worm-Root Untreated-Root
19 GSM601355 13969353 - Untreated-Root Repeat1 vs Worm-Root Repeat1 34,614 INRA 2010-09-28 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Worm-Root Untreated-Root
20 GSM601356 13969354 - Worm-Root Repeat1 vs Untreated-Root Repeat1 34,604 INRA 2010-09-28 [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Untreated-Root Worm-Root
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