Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(5,177)
  blood
(12,563)
  connective
(4,310)
  reproductive
(4,366)
  muscular
(2,432)
  digestive
(4,693)
  liver
(4,788)
  lung
(3,078)
  urinary
(2,439)
  endo/exo-crine
(4,851)
  embryo
(2,059)
  adult aerial structure
(2,705)
  young aerial structure
(921)
  root
(1,529)
  meristem/growing tissue
(366)
  flower/sexual organ
(436)
  seed/fruit/grain
(643)
  pooled
(6,725)
  unclassified
(45,043)
  all
(109,124)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM662369 [Exp4_Cy5_root apex without MCP_rep4]-[Exp4_Cy3_root base with MCP_rep4] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
2 GSM662367 [Exp4_Cy5_root apex without MCP_rep2]-[Exp4_Cy3_root base with MCP_rep2] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
3 GSM662368 [Exp4_Cy5_root apex with MCP_rep3]-[Exp4_Cy3_root base without MCP_rep3] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
4 GSM662366 [Exp4_Cy5_root apex with MCP_rep1]-[Exp4_Cy3_root base without MCP_rep1] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
5 GSM662363 [Exp3_Cy5_root base without ethylene_rep2]-[Exp3_Cy3_root base with ethylene_rep2] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
6 GSM662362 [Exp3_Cy5_root base with ethylene_rep1]-[Exp3_Cy3_root base without ethylene_rep1] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
7 GSM662365 [Exp3_Cy3_root base without ethylene_rep4]-[Exp3_Cy5_root base with ethylene_rep4] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
8 GSM662364 [Exp3_Cy3_root base with ethylene_rep3]-[Exp3_Cy5_root base without ethylene_rep3] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
9 GSM662360 [Exp2_Cy5_root base in Hypoxia_rep4]-[Exp2_Cy3_root base in Air_rep4] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
10 GSM662358 [Exp2_Cy5_root base in Hypoxia_rep2]-[Exp2_Cy3_root base in Air_rep2] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
11 GSM662357 [Exp2_Cy5_root base in Hypoxia_rep1]-[Exp2_Cy3_root base in Air_rep1] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
12 GSM662361 [Exp2_Cy5_root base in Air_rep5]-[Exp2_Cy3_root base in Hypoxia_rep5] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
13 GSM662359 [Exp2_Cy5_root base in Air_rep3]-[Exp2_Cy3_root base in Hypoxia_rep3] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
14 GSM662356 [Exp1_Cy5_root base in Hypoxia_rep6]-[Exp1_Cy3_root apex in Hypoxia_rep6] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
15 GSM662354 [Exp1_Cy5_root base in Hypoxia_rep4]-[Exp1_Cy3_root apex in Hypoxia_rep4] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
16 GSM662352 [Exp1_Cy5_root base in Hypoxia_rep2]-[Exp1_Cy3_root apex in Hypoxia_rep2] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
17 GSM662355 [Exp1_Cy5_root apex in Hypoxia_rep5]-[Exp1_Cy3_root base in Hypoxia_rep5] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
18 GSM662353 [Exp1_Cy5_root apex in Hypoxia_rep3]-[Exp1_Cy3_root base in Hypoxia_rep3] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
19 GSM662351 [Exp1_Cy5_root apex in Hypoxia_rep1]-[Exp1_Cy3_root base in Hypoxia_rep1] 14,118 University of Tokyo 2011-01-27 [cDNA Array] Maize SAM1.2 Array (GPL4521) RNA Zea mays
Zea mays
root Maize primary root cortex
20 GSM205577 wt_vs_jai1_root6hr_3 32,448 Plant Genomics 2007-06-25 [cDNA Array] Potato 10k cDNA array version 3 (GPL1902) RNA Solanum lycopersicum
Solanum lycopersicum
root wt_vs_jai1_root6hr_3
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