Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(103)
  Primates
(0)
  Rodents
(0)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(60)
  Bacteria
(0)
  Viruses
(0)
  Phages
(0)
  Unclassified
(12)
  All
(175)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(174)
  Oligo Array
(1)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(175)
 
  brain
(0)
  blood
(0)
  connective
(28)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(74)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(72)
  all
(174)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM110454 Sugarcane transcriptome - ch1:Phosphate deprivation_6h_exp_1; ch2:control_6h_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_6h_exp_1 Phosphate_6h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_6h_exp_1; ch2:control_6h_1 (L) description:Phosphate deficiency; 6h_experimental x 6h_control (experiment 1)
2 GSM110455 Sugarcane transcriptome - ch1:Phosphate deprivation_6h_exp_1; ch2:control_6h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_6h_exp_1 Phosphate_6h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_6h_exp_1; ch2:control_6h_1 (R) description:Phosphate deficiency; 6h_experimental x 6h_control (experiment 1)
3 GSM110456 Sugarcane transcriptome - ch2:Phosphate deprivation_6h_exp_2; ch1:control_6h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_6h_control_2 Phosphate_6h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_6h_exp_2; ch1:control_6h_2 (L) description:Phosphate deficiency; 6h_experimental x 6h_control (experiment 2)
4 GSM110457 Sugarcane transcriptome - ch2:Phosphate deprivation_6h_exp_2; ch1:control_6h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_6h_control_2 Phosphate_6h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_6h_exp_2; ch1:control_6h_2 (R) description:Phosphate deficiency; 6h_experimental x 6h_control (experiment 2)
5 GSM110458 Sugarcane transcriptome - ch1:Phosphate deprivation_12h_exp_1; ch2:control_12h_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_12h_exp_1 Phosphate_12h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_12h_exp_1; ch2:control_12h_1 (L) description:Phosphate deficiency; 12h_experimental x 12h_control (experiment 1)
6 GSM110459 Sugarcane transcriptome - ch1:Phosphate deprivation_12h_exp_1; ch2:control_12h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_12h_exp_1 Phosphate_12h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_12h_exp_1; ch2:control_12h_1 (R) description:Phosphate deficiency; 12h_experimental x 12h_control (experiment 1)
7 GSM110460 Sugarcane transcriptome - ch2:Phosphate deprivation_12h_exp_2; ch1:control_12h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_12h_control_2 Phosphate_12h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_12h_exp_2; ch1:control_12h_2 (L) description:Phosphate deficiency; 12h_experimental x 12h_control (experiment 2)
8 GSM110461 Sugarcane transcriptome - ch2:Phosphate deprivation_12h_exp_2; ch1:control_12h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_12h_control_2 Phosphate_12h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_12h_exp_2; ch1:control_12h_2 (R) description:Phosphate deficiency; 12h_experimental x 12h_control (experiment 2)
9 GSM110462 Sugarcane transcriptome - ch1:Phosphate deprivation_24h_exp_1; ch2:control_24h_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_24h_exp_1 Phosphate_24h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_24h_exp_1; ch2:control_24h_1 (L) description:Phosphate deficiency; 24h_experimental x 24h_control (experiment 1)
10 GSM110463 Sugarcane transcriptome - ch1:Phosphate deprivation_24h_exp_1; ch2:control_24h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_24h_exp_1 Phosphate_24h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_24h_exp_1; ch2:control_24h_1 (R) description:Phosphate deficiency; 24h_experimental x 24h_control (experiment 1)
11 GSM110464 Sugarcane transcriptome - ch2:Phosphate deprivation_24h_exp_2; ch1:control_24h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_24h_control_2 Phosphate_24h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_24h_exp_2; ch1:control_24h_2 (L) description:Phosphate deficiency; 24h_experimental x 24h_control (experiment 2)
12 GSM110465 Sugarcane transcriptome - ch2:Phosphate deprivation_24h_exp_2; ch1:control_24h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_24h_control_2 Phosphate_24h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_24h_exp_2; ch1:control_24h_2 (R) description:Phosphate deficiency; 24h_experimental x 24h_control (experiment 2)
13 GSM110466 Sugarcane transcriptome - ch1:Phosphate deprivation_48h_exp_1; ch2:control_48h_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_48h_exp_1 Phosphate_48h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_48h_exp_1; ch2:control_48h_1 (L) description:Phosphate deficiency; 48h_experimental x 48h_control (experiment 1)
14 GSM110467 Sugarcane transcriptome - ch1:Phosphate deprivation_48h_exp_1; ch2:control_48h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_48h_exp_1 Phosphate_48h_control_1 title:Sugarcane transcriptome - ch1:Phosphate deprivation_48h_exp_1; ch2:control_48h_1 (R) description:Phosphate deficiency; 48h_experimental x 48h_control (experiment 1)
15 GSM110468 Sugarcane transcriptome - ch2:Phosphate deprivation_48h_exp_2; ch1:control_48h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_48h_control_2 Phosphate_48h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_48h_exp_2; ch1:control_48h_2 (L) description:Phosphate deficiency; 48h_experimental x 48h_control (experiment 2)
16 GSM110469 Sugarcane transcriptome - ch2:Phosphate deprivation_48h_exp_2; ch1:control_48h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Phosphate_48h_control_2 Phosphate_48h_exp_2 title:Sugarcane transcriptome - ch2:Phosphate deprivation_48h_exp_2; ch1:control_48h_2 (R) description:Phosphate deficiency; 48h_experimental x 48h_control (experiment 2)
17 GSM110470 Sugarcane transcriptome - ch1: Herbivory_30min_exp_1; ch2: Herbivory_control_30min_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Herbivory_30min_exp_1 Herbivory_30min_control_1 title:Sugarcane transcriptome - ch1: Herbivory_30min_exp_1; ch2: Herbivory_control_30min_1 (L) description:Herbivory by Diatraea saccharalis: 30 min_experimental x 30 min_control (experiment 1)
18 GSM110471 Sugarcane transcriptome - ch1: Herbivory_30min_exp_1; ch2: Herbivory_control_30min_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Herbivory_30min_exp_1 Herbivory_30min_control_1 title:Sugarcane transcriptome - ch1: Herbivory_30min_exp_1; ch2: Herbivory_control_30min_1 (R) description:Herbivory by Diatraea saccharalis: 30 min_experimental x 30 min_control (experiment 1)
19 GSM110472 Sugarcane transcriptome - ch2: Herbivory_30min_exp_2; ch1: Herbivory_control_30min_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Herbivory_30min_control_2 Herbivory_30min_exp_2 title:Sugarcane transcriptome - ch2: Herbivory_30min_exp_2; ch1: Herbivory_control_30min_2 (L) description:Herbivory by Diatraea saccharalis: 30 min_experimental x 30 min_control (experiment 2)
20 GSM110473 Sugarcane transcriptome - ch2: Herbivory_30min_exp_2; ch1: Herbivory_control_30min_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:Herbivory_30min_control_2 Herbivory_30min_exp_2 title:Sugarcane transcriptome - ch2: Herbivory_30min_exp_2; ch1: Herbivory_control_30min_2 (R) description:Herbivory by Diatraea saccharalis: 30 min_experimental x 30 min_control (experiment 2)
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