Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

All
(931,947)

SAGE NlaIII
(1,683)

SAGE RsaI
(3)

SAGE Sau3A
(54)

MPSS
(439)

GeneChip
(391,468)

Tiling Array
(22,222)

cDNA Array
(104,397)

Oligo Array
(247,270)

endo/exo-crine
(4,767)

embryo
(2,043)

adult aerial structure
(2,637)

young aerial structure
(921)

root
(1,502)

meristem/growing tissue
(294)

flower/sexual organ
(436)

seed/fruit/grain
(643)

pooled
(6,708)

unclassified
(42,150)

all
(104,397)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM495727	13969145 - det1 dark-2 vs col0 dark-2	34,615	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
2	GSM495729	13969147 - det1 light-2 vs col0 light-2	34,610	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
3	GSM495728	13969146 - col0 light-2 vs det1 light-2	34,598	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
4	GSM495731	13969149 - det1 dark-1 vs col0 dark-1	34,597	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
5	GSM495730	13969148 - col0 dark-1 vs det1 dark-1	34,591	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
6	GSM495726	13969144 - col0 dark-2 vs det1 dark-2	34,584	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
7	GSM495724	13969142 - col0 dark-2 vs col deet-2	34,583	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
8	GSM495720	13969136 - col0 dark-1 vs col deet-1	34,544	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
9	GSM495721	13969137 - col deet-1 vs col0 dark-1	34,433	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
10	GSM495722	13969140 - col0 light-1 vs det1 light-1	34,404	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
11	GSM495725	13969143 - col deet-2 vs col0 dark-2	34,366	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
12	GSM495723	13969141 - det1 light-1 vs col0 light-1	34,358	INRA	2010-01-12	[cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553)	RNA	Arabidopsis thaliana	young aerial structure	- Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light
13	GSM983112	seedling_water control_24hr_replicate1 [24C_A1]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_24hr_replicate1 [24C_A1]
14	GSM983113	seedling_water control_24hr_replicate2 [24C_A2]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_24hr_replicate2 [24C_A2]
15	GSM983114	seedling_water control_24hr_replicate1_rescan [24C_B1]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_24hr_replicate1_rescan [24C_B1]
16	GSM983115	seedling_water control_24hr_replicate2_rescan [24C_B2]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_24hr_replicate2_rescan [24C_B2]
17	GSM983116	seedling_water control_48hr_replicate1 [48C_A1]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_48hr_replicate1 [48C_A1]
18	GSM983117	seedling_water control_48hr_replicate2 [48C_A2]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_48hr_replicate2 [48C_A2]
19	GSM983118	seedling_water control_48hr_replicate1_rescan [48C_B1]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_48hr_replicate1_rescan [48C_B1]
20	GSM983119	seedling_water control_48hr_replicate2_rescan [48C_B2]	26,496	University of Georgia	2012-08-09	[cDNA Array] Loblolly pine 26K cDNA array v3.0, PtGen3 (GPL15915)	RNA	Pinus taeda	young aerial structure	seedling_water control_48hr_replicate2_rescan [48C_B2]

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