Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(390)		   Primates
(0)		   Rodents
(0)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(23)		   Bacteria
(0)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(413)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(81)		   Tiling Array
(0)		   cDNA Array
(214)		   Oligo Array
(109)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(9)		   Other
(0)		   All
(413)		  
  brain
(0)		   blood
(33)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(76)		   all
(109)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM401041 TNFalpha-treated cells vs. untreated control cells, replicate 1 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow TNFalpha-treated K562 cells Untreated K562 cells
2 GSM401042 TNFalpha-treated cells vs. untreated control cells, replicate 2 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Untreated K562 cells TNFalpha-treated K562 cells
3 GSM401043 TNFalpha-treated cells vs. untreated control cells, replicate 3 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow TNFalpha-treated K562 cells Untreated K562 cells
4 GSM401044 TNFalpha-treated cells vs. untreated control cells, replicate 4 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Untreated K562 cells TNFalpha-treated K562 cells
5 GSM401045 TNFalpha-treated cells vs. untreated control cells, replicate 5 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow TNFalpha-treated K562 cells Untreated K562 cells
6 GSM401046 TNFalpha-treated cells vs. untreated control cells, replicate 6 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Untreated K562 cells TNFalpha-treated K562 cells
7 GSM401047 Heteronemin-treated cells vs. untreated control cells, replicate 1 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Heteronemin-treated K562 cells Untreated K562 cells
8 GSM401048 Heteronemin-treated cells vs. untreated control cells, replicate 2 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Untreated K562 cells Heteronemin-treated K562 cells
9 GSM401049 Heteronemin-treated cells vs. untreated control cells, replicate 3 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Heteronemin-treated K562 cells Untreated K562 cells
10 GSM401050 Heteronemin-treated cells vs. untreated control cells, replicate 4 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Untreated K562 cells Heteronemin-treated K562 cells
11 GSM401051 Heteronemin-treated cells vs. untreated control cells, replicate 5 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Heteronemin-treated K562 cells Untreated K562 cells
12 GSM401052 Heteronemin-treated cells vs. untreated control cells, replicate 6 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Untreated K562 cells Heteronemin-treated K562 cells
13 GSM401053 Heteronemin & TNFalpha co-treated cells vs.TNFalpha-treated cells, replicate 1 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Heteronemin & TNFalpha co-treated K562 cells TNFalpha-treated K562 cells
14 GSM401054 Heteronemin & TNFalpha co-treated cells vs.TNFalpha-treated cells, replicate 2 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow TNFalpha-treated K562 cells Heteronemin & TNFalpha co-treated K562 cells
15 GSM401055 Heteronemin & TNFalpha co-treated cells vs.TNFalpha-treated cells, replicate 3 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Heteronemin & TNFalpha co-treated K562 cells TNFalpha-treated K562 cells
16 GSM401056 Heteronemin & TNFalpha co-treated cells vs.TNFalpha-treated cells, replicate 4 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow TNFalpha-treated K562 cells Heteronemin & TNFalpha co-treated K562 cells
17 GSM401057 Heteronemin & TNFalpha co-treated cells vs.TNFalpha-treated cells, replicate 5 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Heteronemin & TNFalpha co-treated K562 cells TNFalpha-treated K562 cells
18 GSM401058 Heteronemin & TNFalpha co-treated cells vs.TNFalpha-treated cells, replicate 6 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2009-05-08 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow TNFalpha-treated K562 cells Heteronemin & TNFalpha co-treated K562 cells
19 GSM498228 Valproic acid-treated cells vs. untreated cells at time point 2 hrs, replicate 1 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2010-01-19 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Valproic acid-treated K562 cells at time point 2 hrs Untreated K562 cells at time point 2 hrs
20 GSM498229 Valproic acid-treated cells vs. untreated cells at time point 2 hrs, replicate 2 45,220 Laboratoire de Biologie Moléculaire et Cellulaire du Cancer 2010-01-19 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens		 bone marrow Valproic acid-treated K562 cells at time point 2 hrs Untreated K562 cells at time point 2 hrs
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