Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Cancer Genome Anatomy Project (CGAP) SAGE Libraries (GSE14) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) National Cancer Institute 2001-11-29 Homo sapiens
Homo sapiens
774,534,628
(6,246,247 x 124)
12 23 17 5 1 8 4 1 6 32 11 3 1 by_platform
by_series
2 Cancer Genome Anatomy Project (CGAP) Human LongSAGE (GSE1902) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) National Cancer Institute 2004-10-28 Homo sapiens
Homo sapiens
549,669,736
(6,246,247 x 88)
11 15 2 1 1 8 4 1 1 32 9 3 by_platform
by_series
3 Mouse Atlas of Gene Expression Project (GSE4726) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Canada's Michael Smith Genome Sciences Centre 2006-04-26 Mus musculus
Mus musculus
490,560,048
(2,477,576 x 198)
70 9 5 14 11 12 3 7 15 22 17 13 by_platform
by_series
4 Cancer Genome Anatomy Project (CGAP) SAGE Libraries (GSE14) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) National Cancer Institute 2001-11-29 Homo sapiens
Homo sapiens
262,292,586
(802,118 x 327)
80 30 18 28 4 25 10 7 5 76 9 33 2 by_platform
by_series
5 Cancer Genome Anatomy Project (CGAP) Human SAGE (GSE15309) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) National Cancer Institute 2009-03-19 Homo sapiens
Homo sapiens
262,292,586
(802,118 x 327)
80 30 18 28 4 25 10 7 5 76 9 33 2 by_platform
by_series
6 Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE (GSE15314) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) National Cancer Institute 2009-03-19 Homo sapiens
Homo sapiens
224,864,892
(6,246,247 x 36)
1 8 15 4 5 2 1 by_platform
by_series
7 Cancer Genome Anatomy Project (CGAP) SAGE Libraries (GSE14) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) National Cancer Institute 2001-11-29 Mus musculus
Mus musculus
221,068,960
(789,532 x 280)
86 30 13 18 12 12 4 7 9 33 41 15 by_platform
by_series
8 Cancer Genome Anatomy Project (CGAP) Mouse SAGE (GSE15311) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) National Cancer Institute 2009-03-19 Mus musculus
Mus musculus
221,068,960
(789,532 x 280)
86 30 13 18 12 12 4 7 9 33 41 15 by_platform
by_series
9 Cervical Tissue Long SAGE (GSE7433) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) BCCRC 2007-04-02 Homo sapiens
Homo sapiens
99,939,952
(6,246,247 x 16)
16 by_platform
by_series
10 Cancer Genome Anatomy Project (CGAP) SAGE Libraries (GSE14) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) National Cancer Institute 2001-11-29 Mus musculus
Mus musculus
84,237,584
(2,477,576 x 34)
2 15 1 2 3 1 1 9 by_platform
by_series
11 Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE (GSE15312) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) National Cancer Institute 2009-03-19 Mus musculus
Mus musculus
84,237,584
(2,477,576 x 34)
2 15 1 2 3 1 1 9 by_platform
by_series
12 LNCaP Atlas: Gene expression associated with in vivo progression to castration-recurrent prostate cancer (GSE18402) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) British Columbia Cancer Agency 2009-10-02 Homo sapiens
Homo sapiens
56,216,223
(6,246,247 x 9)
9 by_platform
by_series
13 EST mining of yellow potato and gene expression profiling of its infection by P. infestans using SAGE - SOLEXA (GSE11781) [SAGE NlaIII] SAGE:17:NlaIII:Solanum phureja (GPL6957) Universidad de los Andes 2008-06-13 Solanum phureja
Solanum phureja
45,754,758
(7,625,793 x 6)
6 by_platform
by_series
14 Molecular Profiling of Primitive Hematopoietic Cells Generated In Vitro from Human Embryonic Stem Cells and In Vivo during Embryogenesis (GSE11795) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) Canada's Michael Smith Genome Sciences Centre 2008-06-16 Homo sapiens
Homo sapiens
37,477,482
(6,246,247 x 6)
2 1 1 2 by_platform
by_series
15 Dissecting Gene Expression Networks in Mammalian Organogenesis (MORGEN) (GSE8420) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Canada's Michael Smith Genome Sciences Centre 2007-07-09 Mus musculus
Mus musculus
34,686,064
(2,477,576 x 14)
6 6 2 by_platform
by_series
16 Differentiated vs. undifferentiated promyelocytic cell lines (HL-60 and KG-1) and Neutrophiles (GSE43211) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) King Faisal Specialist Hospital & Research Centre 2012-12-31 Homo sapiens
Homo sapiens
31,231,235
(6,246,247 x 5)
5 by_platform
by_series
17 Transcript Analysis of Human Mammary Cell Subsets using SAGE (GSE11387) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) Canada's Michael Smith Genome Sciences Centre 2008-05-08 Homo sapiens
Homo sapiens
24,984,988
(6,246,247 x 4)
4 by_platform
by_series
18 Transcript Analysis of Human Mammary Cell Subsets (GSE11395) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) Canada's Michael Smith Genome Sciences Centre 2008-05-09 Homo sapiens
Homo sapiens
24,984,988
(6,246,247 x 4)
4 by_platform
by_series
19 Comprehensive Serial Analysis of Gene Expression of the Cervical Epithelium Transcriptome (GSE6252) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) BCCRC 2006-11-08 Homo sapiens
Homo sapiens
24,984,988
(6,246,247 x 4)
4 by_platform
by_series
20 Effect of active smoking on bronchial epithelial transcriptome (24 SAGE libraries) (GSE5473) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) BC Cancer Research Centre 2006-08-08 Homo sapiens
Homo sapiens
19,250,832
(802,118 x 24)
24 by_platform
by_series
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