Gene Expression Omnibus (GEO) Overview latest dataset list Taxonomic Group:Rodents, Platform class:all http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset Thu, 23 May 2013 04:16:05 -0500 Thu, 23 May 2013 04:16:05 -0500 rss74/v0.3+mod http://blogs.law.harvard.edu/tech/rss en-us Gene expression profiles in liver of F344 rat treated with chemical [GSE45650/GPL16936] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45650/GPL16936 GSE45650]
Platform: [Oligo Array] Agilent-015749 Rat ToxArrayIII ver.2 44Kx4 array [GPL16936]
Species: [Rodents] Rattus norvegicusRattus norvegicus
Institute: Chemicals Evaluation and Research Institute, Japan
Submission date: 2013-03-30
Data size (probes x samples): 527,040 (21,960 x 24)
NCBI FTP site: by_series / by_platform]]> Sat, 30 Mar 2013 00:00:00 -0500 Closely related parasites trigger distinct innate immune signaling pathways_I [GSE45632/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45632/GPL6887 GSE45632]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Pennsylvania
Submission date: 2013-03-29
Data size (probes x samples): 543,372 (45,281 x 12)
NCBI FTP site: by_series / by_platform]]> Fri, 29 Mar 2013 00:00:00 -0500 Closely related parasites trigger distinct innate immune signaling pathways [GSE45634/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45634/GPL6887 GSE45634]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Pennsylvania
Submission date: 2013-03-29
Data size (probes x samples): 543,372 (45,281 x 12)
NCBI FTP site: by_series / by_platform]]> Fri, 29 Mar 2013 00:00:00 -0500 Prdm14 [GSE45509/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45509/GPL6887 GSE45509]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Cambridge
Submission date: 2013-03-26
Data size (probes x samples): 543,372 (45,281 x 12)
NCBI FTP site: by_series / by_platform]]> Tue, 26 Mar 2013 00:00:00 -0500 Genome-wide identification of genes differentially expressed between wild-type and Prdm14-deficient ES cells grown in 2i culture conditions. [GSE45507/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45507/GPL6887 GSE45507]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Cambridge
Submission date: 2013-03-26
Data size (probes x samples): 271,686 (45,281 x 6)
NCBI FTP site: by_series / by_platform]]> Tue, 26 Mar 2013 00:00:00 -0500 Genome-wide identification of genes differentially expressed between control and Prdm14 overexpressing ES cells grown in serum conditions. [GSE45508/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45508/GPL6887 GSE45508]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Cambridge
Submission date: 2013-03-26
Data size (probes x samples): 271,686 (45,281 x 6)
NCBI FTP site: by_series / by_platform]]> Tue, 26 Mar 2013 00:00:00 -0500 SFMBT1 Functions with LSD1 to Regulate Expression of Canonical Histone Genes and Chromatin-Related Factors [GSE45489/GPL13112] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45489/GPL13112 GSE45489]
Platform: [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) [GPL13112]
Species: [Rodents] Mus musculusMus musculus
Institute: HHMI/NYU
Submission date: 2013-03-25
Data size (probes x samples): 8 (0 x 8)
NCBI FTP site: by_series / by_platform]]> Mon, 25 Mar 2013 00:00:00 -0500 SFMBT1 Functions with LSD1 to Regulate Expression of Canonical Histone Genes and Chromatin-Related Factors [ChIP-Seq] [GSE45441/GPL13112] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45441/GPL13112 GSE45441]
Platform: [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) [GPL13112]
Species: [Rodents] Mus musculusMus musculus
Institute: HHMI/NYU
Submission date: 2013-03-22
Data size (probes x samples): 8 (0 x 8)
NCBI FTP site: by_series / by_platform]]> Fri, 22 Mar 2013 00:00:00 -0500 Cell-autonomous function of Runx1 transcriptionally regulates megakaryocytic maturation in mice (ChIP-seq) [GSE45372/GPL11002] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45372/GPL11002 GSE45372]
Platform: [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) [GPL11002]
Species: [Rodents] Mus musculusMus musculus
Institute: Weizmann Institute of Science
Submission date: 2013-03-21
Data size (probes x samples): 3 (0 x 3)
NCBI FTP site: by_series / by_platform]]> Thu, 21 Mar 2013 00:00:00 -0500 Cell-autonomous function of Runx1 transcriptionally regulates megakaryocytic maturation in mice [GSE45374/GPL11002] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45374/GPL11002 GSE45374]
Platform: [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) [GPL11002]
Species: [Rodents] Mus musculusMus musculus
Institute: Weizmann Institute of Science
Submission date: 2013-03-21
Data size (probes x samples): 3 (0 x 3)
NCBI FTP site: by_series / by_platform]]> Thu, 21 Mar 2013 00:00:00 -0500 Laser Capture Microdissection-Reduced Representation Bisulfite Sequencing (LCM-RRBS) maps changes in DNA methylation associated with gonadectomy-induced adrenocortical neoplasia in the mouse [GSE45361/GPL13112] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45361/GPL13112 GSE45361]
Platform: [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) [GPL13112]
Species: [Rodents] Mus musculusMus musculus
Institute: Washington University in St. Louis
Submission date: 2013-03-20
Data size (probes x samples): 17 (0 x 17)
NCBI FTP site: by_series / by_platform]]> Wed, 20 Mar 2013 00:00:00 -0500 Profiling of copy-number variation between DNA isolation from different tissues of BN and ACI rats [GSE45308/GPL9991] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45308/GPL9991 GSE45308]
Platform: [Oligo Array] Hubrecht Rat 2.1M HX1 [GPL9991]
Species: [Rodents] Rattus norvegicusRattus norvegicus
Institute: Hubrecht Institute
Submission date: 2013-03-19
Data size (probes x samples): 51,410,304 (2,142,096 x 24)
NCBI FTP site: by_series / by_platform]]> Tue, 19 Mar 2013 00:00:00 -0500 mRNA profiling of GGT-HIF2aM3 (gamma-HIF2alphaM3) kidney cortex [GSE45254/GPL13112] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45254/GPL13112 GSE45254]
Platform: [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) [GPL13112]
Species: [Rodents] Mus musculusMus musculus
Institute: Weill Cornell Medical College
Submission date: 2013-03-18
Data size (probes x samples): 12 (0 x 12)
NCBI FTP site: by_series / by_platform]]> Mon, 18 Mar 2013 00:00:00 -0500 Gene expression alterations due to defective Fbw7-dependent cyclin E ubiquitination in bone marrow erythroid cells [GSE45135/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45135/GPL6887 GSE45135]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: Northwestern University
Submission date: 2013-03-13
Data size (probes x samples): 543,372 (45,281 x 12)
NCBI FTP site: by_series / by_platform]]> Wed, 13 Mar 2013 00:00:00 -0500 Retinoic acid signaling is essential for HSC development [GSE45020/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE45020/GPL6887 GSE45020]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Toronto
Submission date: 2013-03-11
Data size (probes x samples): 271,686 (45,281 x 6)
NCBI FTP site: by_series / by_platform]]> Mon, 11 Mar 2013 00:00:00 -0500 Oprl1 regulation of amygdala-dependent fear in mice and humans with PTSD [GSE44944/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE44944/GPL6887 GSE44944]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: Emory University
Submission date: 2013-03-07
Data size (probes x samples): 543,372 (45,281 x 12)
NCBI FTP site: by_series / by_platform]]> Thu, 07 Mar 2013 00:00:00 -0500 CG methylated microarrays identify novel methylated sequence bound by the CEBPB|ATF4 heterodimer that are active in vivo [GSE44942/GPL13112] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE44942/GPL13112 GSE44942]
Platform: [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) [GPL13112]
Species: [Rodents] Mus musculusMus musculus
Institute: NCI, NIH
Submission date: 2013-03-07
Data size (probes x samples): 4 (0 x 4)
NCBI FTP site: by_series / by_platform]]> Thu, 07 Mar 2013 00:00:00 -0500 Tet1 as a Negative Regulator of Somatic Cell Reprogramming [GSE44935/GPL13112] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE44935/GPL13112 GSE44935]
Platform: [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) [GPL13112]
Species: [Rodents] Mus musculusMus musculus
Institute: Guangzhou Institutes Of Biomedicine and Health Chinese Academy Of Science
Submission date: 2013-03-06
Data size (probes x samples): 2 (0 x 2)
NCBI FTP site: by_series / by_platform]]> Wed, 06 Mar 2013 00:00:00 -0500 Histamine H3 Receptor Integrates Peripheral Inflammatory Signals in the Neurogenic Control of Immune Responses and Autoimmune Disease Susceptibility [GSE44873/GPL8321] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE44873/GPL8321 GSE44873]
Platform: [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array [GPL8321]
Species: [Rodents] Mus musculusMus musculus
Institute: University of Vermont
Submission date: 2013-03-05
Data size (probes x samples): 181,520 (22,690 x 8)
NCBI FTP site: by_series / by_platform]]> Tue, 05 Mar 2013 00:00:00 -0500 Gene-expression changes in cerium chloride-induced injury of mouse hippocampus [GSE44906/GPL6887] http://lifesciencedb.jp/geo-e/?division=Rodents&technology=all&order=date&action=ListDataset GSE44906/GPL6887 GSE44906]
Platform: [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip [GPL6887]
Species: [Rodents] Mus musculusMus musculus
Institute: Medical College of Soochow University
Submission date: 2013-03-05
Data size (probes x samples): 90,562 (45,281 x 2)
NCBI FTP site: by_series / by_platform]]> Tue, 05 Mar 2013 00:00:00 -0500