Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(7,355)
  Tiling Array
(676)
  cDNA Array
(10,532)
  Oligo Array
(19,682)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(729)
  Other
(57)
  All
(39,082)
 
  brain
(3)
  blood
(111)
  connective
(15)
  reproductive
(43)
  muscular
(0)
  digestive
(196)
  liver
(0)
  lung
(36)
  urinary
(10)
  endo/exo-crine
(123)
  embryo
(18)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(23)
  unclassified
(6,777)
  all
(7,355)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
6661 GSM558108 2010Dkai2nd DD12h 2,515 Waseda University 2010-06-21 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:DkaiABC at DD 12, rep2 (2010 June) title:2010Dkai2nd DD12h description:Gene expression data from Synechococcus elongatus PCC 7942
6662 GSM702556 WT at LL 4h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:wild type cells collected at hour 4 under continuous light (LL) title:WT at LL 4h (2011 March) description:Synechococcus wild type cells collected at hour 4 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011WT_LL4
6663 GSM702557 WT at LL 8 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:wild type cells collected at hour 8 under continuous light (LL) title:WT at LL 8 h (2011 March) description:Synechococcus wild type cells collected at hour 8 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011WT_LL8
6664 GSM702558 WT at LL 12 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:wild type cells collected at hour 12 under continuous light (LL) title:WT at LL 12 h (2011 March) description:Synechococcus wild type cells collected at hour 12 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011WT_LL12
6665 GSM702559 WT at LL 16 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:wild type cells collected at hour 16 under continuous light (LL) title:WT at LL 16 h (2011 March) description:Synechococcus wild type cells collected at hour 16 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011WT_LL16
6666 GSM702560 WT at LL 20 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:wild type cells collected at hour 20 under continuous light (LL) title:WT at LL 20 h (2011 March) description:Synechococcus wild type cells collected at hour 20 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011WT_LL20
6667 GSM702561 WT at LL 24 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:wild type cells collected at hour 24 under continuous light (LL) title:WT at LL 24 h (2011 March) description:Synechococcus wild type cells collected at hour 24 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011WT_LL24
6668 GSM702562 rpoD6-null at LL 4h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpoD6-null mutant cells collected at hour 4 under continuous light (LL) title:rpoD6-null at LL 4h (2011 March) description:Synechococcus rpoD6-null mutant cells collected at hour 4 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpoD6-null_LL4
6669 GSM702563 rpoD6-null at LL 8 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpoD6-null mutant cells collected at hour 8 under continuous light (LL) title:rpoD6-null at LL 8 h (2011 March) description:Synechococcus rpoD6-null mutant cells collected at hour 8 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpoD6-null_LL8
6670 GSM702564 rpoD6-null at LL 12 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpoD6-null mutant cells collected at hour 12 under continuous light (LL) title:rpoD6-null at LL 12 h (2011 March) description:Synechococcus rpoD6-null mutant collected at hour 12 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpoD6-null_LL12
6671 GSM702565 rpoD6-null at LL 16 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpoD6-null mutant cells collected at hour 16 under continuous light (LL) title:rpoD6-null at LL 16 h (2011 March) description:SynechococcusrpoD6-null mutant cells collected at hour 16 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpoD6-null_LL16
6672 GSM702566 rpoD6-null at LL 20 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpoD6-null mutant cells collected at hour 20 under continuous light (LL) title:rpoD6-null at LL 20 h (2011 March) description:Synechococcus rpoD6-null mutant cells collected at hour 20 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpoD6-null_LL20
6673 GSM702567 rpoD6-null at LL 24 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpoD6-null mutant cells collected at hour 24 under continuous light (LL) title:rpoD6-null at LL 24 h (2011 March) description:Synechococcus rpoD6-null mutant cells collected at hour 24 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpoD6-null_LL24
6674 GSM702568 sasA-null at LL 4 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:sasA-null mutant cells collected at hour 4 under continuous light (LL) title:sasA-null at LL 4 h (2011 March) description:Synechococcus sasA-null mutant cells collected at hour 4 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011sasA-null_LL4
6675 GSM702569 sasA-null at LL 8 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:sasA-null mutant cells collected at hour 8 under continuous light (LL) title:sasA-null at LL 8 h (2011 March) description:Synechococcus sasA-null mutant cells collected at hour 8 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011sasA-null_LL8
6676 GSM702570 sasA-null at LL 12 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:sasA-null mutant cells collected at hour 12 under continuous light (LL) title:sasA-null at LL 12 h (2011 March) description:Synechococcus sasA-null mutant cells collected at hour 12 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011sasA-null_LL12
6677 GSM702571 sasA-null at LL 24 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:sasA-null mutant cells collected at hour 24 under continuous light (LL) title:sasA-null at LL 24 h (2011 March) description:Synechococcus sasA-null mutant cells collected at hour 24 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011sasA-null_LL24
6678 GSM702572 rpaA-null at LL 4 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpaA-null mutant cells collected at hour 4 under continuous light (LL) title:rpaA-null at LL 4 h (2011 March) description:Synechococcus rpaA-null mutant cells collected at hour 4 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpaA-null_LL4
6679 GSM702573 rpaA-null at LL 8 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpaA-null mutant cells collected at hour 8 under continuous light (LL) title:rpaA-null at LL 8 h (2011 March) description:Synechococcus rpaA-null mutant cells collected at hour 8 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpaA-null_LL8
6680 GSM702574 rpaA-null at LL 12 h (2011 March) 2,515 Waseda University 2011-04-06 [GeneChip] Affymetrix Custom GeneChip Synechococcus 2515 ORFs v1.0 (GPL8012) RNA Synechococcus elongatus PCC 7942
Synechococcus elongatus PCC 7942
unclassified source_name:rpaA-null mutant cells collected at hour 12 under continuous light (LL) title:rpaA-null at LL 12 h (2011 March) description:Synechococcus rpaA-null mutant cells collected at hour 12 under continuous light (LL) after two 12-h:12-h dark/light cycles from a continuous culture. 2011rpaA-null_LL12
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