Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,349)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(21,920)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(0)
  Other
(0)
  All
(45,091)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(7,560)
  all
(8,349)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
6661 GSM652349 MIT9313 without iron at t53, biological rep1 3,897 MIT 2011-01-10 [GeneChip] Prochlorococcus microarray 11K (GPL11412) RNA Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9313
unclassified source_name:MIT9313 culture 53 hours after resuspension in iron-free media, experimental treatment title:MIT9313 without iron at t53, biological rep1 description:Gene expression of MIT9313 after resuspension in iron-free media, experimental treatment
6662 GSM652350 MIT9313 without iron at t53, biological rep2 3,897 MIT 2011-01-10 [GeneChip] Prochlorococcus microarray 11K (GPL11412) RNA Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9313
unclassified source_name:MIT9313 culture 53 hours after resuspension in iron-free media, experimental treatment title:MIT9313 without iron at t53, biological rep2 description:Gene expression of MIT9313 after resuspension in iron-free media, experimental treatment
6663 GSM652351 MIT9313 without iron at t53, biological rep3 3,897 MIT 2011-01-10 [GeneChip] Prochlorococcus microarray 11K (GPL11412) RNA Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9313
unclassified source_name:MIT9313 culture 53 hours after resuspension in iron-free media, experimental treatment title:MIT9313 without iron at t53, biological rep3 description:Gene expression of MIT9313 after resuspension in iron-free media, experimental treatment
6664 GSM652352 MIT9313 without iron at t72 after iron rescue, biological rep1 3,897 MIT 2011-01-10 [GeneChip] Prochlorococcus microarray 11K (GPL11412) RNA Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9313
unclassified source_name:MIT9313 culture 72 hours after resuspension in iron-free media, experimental treatment, after iron rescue at 54 hours title:MIT9313 without iron at t72 after iron rescue, biological rep1 description:Gene expression of MIT9313 after resuspension in iron-free media, experimental treatment, after iron rescue
6665 GSM652353 MIT9313 without iron at t72 after iron rescue, biological rep2 3,897 MIT 2011-01-10 [GeneChip] Prochlorococcus microarray 11K (GPL11412) RNA Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9313
unclassified source_name:MIT9313 culture 72 hours after resuspension in iron-free media, experimental treatment, after iron rescue at 54 hours title:MIT9313 without iron at t72 after iron rescue, biological rep2 description:Gene expression of MIT9313 after resuspension in iron-free media, experimental treatment, after iron rescue
6666 GSM1139455 wild-type_TM_60min_1 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 9 hrs, biological rep1 title:wild-type_TM_60min_1 description:wild-type strain grown on a TM medium 9 hrs
6667 GSM1139456 wild-type_TM_60min_2 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 9 hrs, biological rep2 title:wild-type_TM_60min_2 description:wild-type strain grown on a TM medium 9 hrs
6668 GSM1139457 wild-type_TM_60min_3 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 9 hrs, biological rep3 title:wild-type_TM_60min_3 description:wild-type strain grown on a TM medium 9 hrs
6669 GSM1139458 wild-type_TM+Si_60min_1 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 8 hrs, 1 hr after addition of 600 ppm SiO2, biological rep1 title:wild-type_TM+Si_60min_1 description:wild-type strain grown on a TM medium 8 hrs, and addition of 600 ppm SiO2 1 hr
6670 GSM1139459 wild-type_TM+Si_60min_2 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 8 hrs, 1 hr after addition of 600 ppm SiO2, biological rep2 title:wild-type_TM+Si_60min_2 description:wild-type strain grown on a TM medium 8 hrs, and addition of 600 ppm SiO2 1 hr
6671 GSM1139460 wild-type_TM+Si_60min_3 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 8 hrs, 1 hr after addition of 600 ppm SiO2, biological rep3 title:wild-type_TM+Si_60min_3 description:wild-type strain grown on a TM medium 8 hrs, and addition of 600 ppm SiO2 1 hr
6672 GSM1139461 wild-type_TM-Fe_60min_1 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 8 hrs, 1 hr after removal of Fe, biological rep1 title:wild-type_TM-Fe_60min_1 description:wild-type strain grown on a TM medium 8 hrs, and removal of Fe 1 hr
6673 GSM1139462 wild-type_TM-Fe_60min_2 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 8 hrs, 1 hr after removal of Fe, biological rep2 title:wild-type_TM-Fe_60min_2 description:wild-type strain grown on a TM medium 8 hrs, and removal of Fe 1 hr
6674 GSM1139463 wild-type_TM-Fe_60min_3 3,873 Kyushu-univ. 2013-05-13 [GeneChip] Riken Thermus thermophilus HB8 4K mRNA array (GPL4902) RNA Thermus thermophilus HB8
Thermus thermophilus HB8
unclassified source_name:T. thermophilus HB8, wild-type, TM medium 8 hrs, 1 hr after removal of Fe, biological rep3 title:wild-type_TM-Fe_60min_3 description:wild-type strain grown on a TM medium 8 hrs, and removal of Fe 1 hr
6675 GSM1267891 Experimental Evolution line A 3,873 University of Massachusetts Amherst 2013-11-19 [GeneChip] Clostridium phytofermentans 3.8K 49-5241 expression array (GPL7481) RNA Clostridium phytofermentans
Clostridium phytofermentans
unclassified source_name:Experimental Evolution line A title:Experimental Evolution line A
6676 GSM1267892 Experimental Evolution line B 3,873 University of Massachusetts Amherst 2013-11-19 [GeneChip] Clostridium phytofermentans 3.8K 49-5241 expression array (GPL7481) RNA Clostridium phytofermentans
Clostridium phytofermentans
unclassified source_name:Experimental Evolution line B title:Experimental Evolution line B
6677 GSM1267893 Experimental Evolution line C 3,873 University of Massachusetts Amherst 2013-11-19 [GeneChip] Clostridium phytofermentans 3.8K 49-5241 expression array (GPL7481) RNA Clostridium phytofermentans
Clostridium phytofermentans
unclassified source_name:Experimental Evolution line C title:Experimental Evolution line C
6678 GSM1267894 Experimental Evolution founder 3,873 University of Massachusetts Amherst 2013-11-19 [GeneChip] Clostridium phytofermentans 3.8K 49-5241 expression array (GPL7481) RNA Clostridium phytofermentans
Clostridium phytofermentans
unclassified source_name:Experimental Evolution founder title:Experimental Evolution founder
6679 GSM1267895 L-Arabinose_rep1 3,873 University of Massachusetts Amherst 2013-11-19 [GeneChip] Clostridium phytofermentans 3.8K 49-5241 expression array (GPL7481) RNA Clostridium phytofermentans
Clostridium phytofermentans
unclassified source_name:L-Arabinose_rep1 title:L-Arabinose_rep1
6680 GSM1267896 L-Arabinose_rep2 3,873 University of Massachusetts Amherst 2013-11-19 [GeneChip] Clostridium phytofermentans 3.8K 49-5241 expression array (GPL7481) RNA Clostridium phytofermentans
Clostridium phytofermentans
unclassified source_name:L-Arabinose_rep2 title:L-Arabinose_rep2
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