Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7,355)		   Tiling Array
(676)		   cDNA Array
(10,532)		   Oligo Array
(19,682)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(51)		   HT-Seq
(729)		   Other
(57)		   All
(39,082)		  
  brain
(19)		   blood
(16)		   connective
(11)		   reproductive
(2)		   muscular
(0)		   digestive
(50)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(3)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(90)		   unclassified
(538)		   all
(729)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
61 GSM979528 Synechocystis PCC6803, 72h, rep1 42,303 University of Freiburg 2012-08-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:Synechocystis PCC6803, 72h after iron limitation stress induction by DFB addition title:Synechocystis PCC6803, 72h, rep1 description:WT_72h.1
62 GSM979529 Synechocystis PCC6803, 72h, rep2 42,303 University of Freiburg 2012-08-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:Synechocystis PCC6803, 72h after iron limitation stress induction by DFB addition title:Synechocystis PCC6803, 72h, rep2 description:WT_72h.2
63 GSM933375 Crop_42hrs_enzyme_run1 0 University of Connectiuct 2012-05-21 [HT Sequencing] Illumina Genome Analyzer (Aeromonas veronii) (GPL15585) SRA Aeromonas veronii
Aeromonas veronii		 unclassified source_name:Leech crop intraluminal fluid title:Crop_42hrs_enzyme_run1 description:42hrs_enzyme_Aeromonas.txt
64 GSM933376 Crop_42hrs_enzyme_run2 0 University of Connectiuct 2012-05-21 [HT Sequencing] Illumina Genome Analyzer (Aeromonas veronii) (GPL15585) SRA Aeromonas veronii
Aeromonas veronii		 unclassified source_name:Leech crop intraluminal fluid title:Crop_42hrs_enzyme_run2 description:42hrs_enzyme_Aeromonas.txt
65 GSM933377 LB_medium_midlog 0 University of Connectiuct 2012-05-21 [HT Sequencing] Illumina Genome Analyzer (Aeromonas veronii) (GPL15585) SRA Aeromonas veronii
Aeromonas veronii		 unclassified source_name:midlog phase cells grown in LB medium title:LB_medium_midlog description:midlog_enzyme_Aeromonas.txt
66 GSM341367 Mid-log_air_rep1_Illumina 0 Georgia Institute of Technology 2008-11-10 [HT Sequencing] Illumina Genome Analyzer (Bacillus anthracis) (GPL9410) SRA Bacillus anthracis
Bacillus anthracis		 unclassified source_name:vegetative cells title:Mid-log_air_rep1_Illumina description:variable = atmosphere: air
67 GSM341368 Mid-log_CO2_rep1_Illumina 0 Georgia Institute of Technology 2008-11-10 [HT Sequencing] Illumina Genome Analyzer (Bacillus anthracis) (GPL9410) SRA Bacillus anthracis
Bacillus anthracis		 unclassified source_name:vegetative cells title:Mid-log_CO2_rep1_Illumina description:variable = atmosphere: 15% CO2
68 GSM442136 Bacteroides thetaiotaomicron-Input 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-Input description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
69 GSM442137 Bacteroides thetaiotaomicron-Additional library 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-Additional library description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
70 GSM442138 Bacteroides thetaiotaomicron-TYG chemostat-15h-1 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-TYG chemostat-15h-1 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
71 GSM442139 Bacteroides thetaiotaomicron-TYG chemostat-15h-2 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-TYG chemostat-15h-2 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
72 GSM442140 Bacteroides thetaiotaomicron-TYG chemostat-45h-1 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-TYG chemostat-45h-1 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
73 GSM442141 Bacteroides thetaiotaomicron-TYG chemostat-45h-2 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-TYG chemostat-45h-2 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
74 GSM442142 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 7 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 7 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
75 GSM442143 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 8 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 8 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
76 GSM442144 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 9 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 9 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
77 GSM442145 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 10 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 10 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
78 GSM442146 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 11 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE1, mouse 11 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
79 GSM442147 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE2, mouse 1 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE2, mouse 1 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
80 GSM442148 Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE2, mouse 2 0 Washington University School of Medicine 2009-08-18 [HT Sequencing] Illumina Genome Analyzer (Bacteroides thetaiotaomicron) (GPL9054) SRA Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron		 unclassified source_name:INSeq DNA title:Bacteroides thetaiotaomicron-monoassociation_Wt mouse-Experiment AGE2, mouse 2 description:Transposon-adjacent DNA isolated by insertion sequencing (INSeq)
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