Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7,355)		   Tiling Array
(676)		   cDNA Array
(10,532)		   Oligo Array
(19,682)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(51)		   HT-Seq
(729)		   Other
(57)		   All
(39,082)		  
  brain
(118)		   blood
(706)		   connective
(170)		   reproductive
(108)		   muscular
(90)		   digestive
(772)		   liver
(78)		   lung
(251)		   urinary
(19)		   endo/exo-crine
(204)		   embryo
(25)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(217)		   unclassified
(36,324)		   all
(39,082)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
181 GSM1022756 BHI-WT-30-B2a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the second of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the second of two separate microarray chips.
182 GSM1022755 BHI-WT-30-B1b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the second of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the first of two separate microarray chips.
183 GSM1022754 BHI-WT-30-B1a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the second of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the first of two separate microarray chips.
184 GSM1022753 BHI-WT-30-A2b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the first of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the second of two separate microarray chips.
185 GSM1022752 BHI-WT-30-A2a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the first of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the second of two separate microarray chips.
186 GSM1022751 BHI-WT-30-A1b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the first of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the first of two separate microarray chips.
187 GSM1022750 BHI-WT-30-A1a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of wild-type Haemophilus influenzae CZ4126/02 grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. It is the first of two wild-type biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the first of two separate microarray chips.
188 GSM1022781 BHI-KO-60-B2b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the second of two separate microarray chips.
189 GSM1022780 BHI-KO-60-B2a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the second of two separate microarray chips.
190 GSM1022779 BHI-KO-60-B1b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the first of two separate microarray chips.
191 GSM1022778 BHI-KO-60-B1a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the first of two separate microarray chips.
192 GSM1022777 BHI-KO-60-A2b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the first of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the second of two separate microarray chips.
193 GSM1022776 BHI-KO-60-A2a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the first of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the second of two separate microarray chips.
194 GSM1022775 BHI-KO-60-A1b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the first of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the first of two separate microarray chips.
195 GSM1022774 BHI-KO-60-A1a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 60 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the first of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the first of two separate microarray chips.
196 GSM1022765 BHI-KO-30-B2b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the second of two separate microarray chips.
197 GSM1022764 BHI-KO-30-B2a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the second of two separate microarray chips.
198 GSM1022763 BHI-KO-30-B1b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the first of two separate microarray chips.
199 GSM1022762 BHI-KO-30-B1a 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the second of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the first of two identical probe sets represented on the first of two separate microarray chips.
200 GSM1022761 BHI-KO-30-A2b 2,194 Center for Genomic Sciences 2012-10-18 [Oligo Array] NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr] (GPL16197) RNA Haemophilus influenzae
Haemophilus influenzae		 pooled This sample is of Haemophilus influenzae CZ4126/02ΔLsr::Cmr grown in brain-heart infusion media and sampled 30 minutes after AI-2 uptake. This strain is a full locus deletion mutant in which the 9 genes of the Lsr locus (LsrKRACDBFGE) are deleted entirely. It is the first of two mutant strain biological replicates used in this experiment, each from separate cultures. This sample represents hybridization data from the second of two identical probe sets represented on the second of two separate microarray chips.
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