Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(756)
  SAGE RsaI
(0)
  SAGE Sau3A
(15)
  MPSS
(35)
  GeneChip
(234,596)
  Tiling Array
(9,457)
  cDNA Array
(39,248)
  Oligo Array
(103,669)
  Bead Array
(90,658)
  Protein Array
(0)
  Antibody
(1,130)
  RT-PCR
(2,916)
  HT-Seq
(13,834)
  Other
(6,106)
  All
(502,421)
 
  brain
(15,394)
  blood
(66,296)
  connective
(14,964)
  reproductive
(11,456)
  muscular
(5,583)
  digestive
(10,378)
  liver
(5,149)
  lung
(12,291)
  urinary
(6,935)
  endo/exo-crine
(23,226)
  embryo
(1,697)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(18,173)
  unclassified
(0)
  all
(234,596)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
21 GSM1070098 sip53 TNF [MO157_HuST] 32,968 WIS 2013-01-24 [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) RNA Homo sapiens
Homo sapiens
pancreas PANC1, sip53, TNFa (0.5 ng/ml, 24 hrs)
22 GSM1070099 siControl [MO158_HuST] 32,968 WIS 2013-01-24 [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) RNA Homo sapiens
Homo sapiens
pancreas PANC1, sicontrol, no treatment
23 GSM1070100 sip53 [MO159_HuST] 32,968 WIS 2013-01-24 [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) RNA Homo sapiens
Homo sapiens
pancreas PANC1, sip53, no treatment
24 GSM1070101 sip53 TNF [MO161_HuST] 32,968 WIS 2013-01-24 [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) RNA Homo sapiens
Homo sapiens
pancreas PANC1, sip53, TNFa (0.5 ng/ml, 24 hrs)
25 GSM933699 breast stroma specimen 6 LEFT LIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
26 GSM933700 breast stroma specimen 6 LEFT UIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
27 GSM933701 breast stroma specimen 6 LEFT UOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
28 GSM933702 breast stroma specimen 6 RIGHT LIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
29 GSM933703 breast stroma specimen 6 RIGHT LOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
30 GSM933704 breast stroma specimen 6 RIGHT UIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
31 GSM933705 breast stroma specimen 6 RIGHT UOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
32 GSM933707 breast stroma specimen 2 LIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
33 GSM933708 breast stroma specimen 2 LOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
34 GSM933709 breast stroma specimen 2 UIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
35 GSM933711 breast stroma specimen 1 LIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
36 GSM933712 breast stroma specimen 1 LOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
37 GSM933713 breast stroma specimen 1 UIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
38 GSM933714 breast stroma specimen 1 UOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
39 GSM933716 breast stroma specimen 13 LEFT LIQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
40 GSM933717 breast stroma specimen 13 LEFT LOQ 0 Windber Research Institute 2012-05-21 [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) genomic Homo sapiens
Homo sapiens
breast OCT embedded breast stroma
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