Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(78)
  SAGE RsaI
(0)
  SAGE Sau3A
(5)
  MPSS
(2)
  GeneChip
(8,352)
  Tiling Array
(1,621)
  cDNA Array
(1,937)
  Oligo Array
(5,065)
  Bead Array
(2,741)
  Protein Array
(0)
  Antibody
(38)
  RT-PCR
(205)
  HT-Seq
(1,977)
  Other
(117)
  All
(22,139)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1101 Most “dark matter” transcripts are associated with known genes (GSE19289) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) Mount Sinai School of Medicine 2009-12-02 Homo sapiens
Homo sapiens
7
(0 x 7)
2 2 2 1 by_platform
by_series
1102 TBP ChIP-chip on Jurkat cells (GSE12256) [Tiling Array] [Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3 (GPL4912) University of Kentucky 2008-07-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1103 TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions (GSE22572) [Tiling Array] [Hs35b_P01R] Affymetrix Human Tiling 2.0R Set, Array 1 (GPL4910) Rutgers, the State University of New Jersey 2010-06-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1104 TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions (GSE22572) [Tiling Array] [Hs35b_P02R] Affymetrix Human Tiling 2.0R Set, Array 2 (GPL4911) Rutgers, the State University of New Jersey 2010-06-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1105 TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions (GSE22572) [Tiling Array] [Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3 (GPL4912) Rutgers, the State University of New Jersey 2010-06-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1106 TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions (GSE22572) [Tiling Array] [Hs35b_P04R] Affymetrix Human Tiling 2.0R Set, Array 4 (GPL4913) Rutgers, the State University of New Jersey 2010-06-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1107 TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions (GSE22572) [Tiling Array] [Hs35b_P05R] Affymetrix Human Tiling 2.0R Set, Array 5 (GPL4914) Rutgers, the State University of New Jersey 2010-06-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1108 TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions (GSE22572) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Rutgers, the State University of New Jersey 2010-06-25 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1109 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P01R] Affymetrix Human Tiling 2.0R Set, Array 1 (GPL4910) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1110 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P02R] Affymetrix Human Tiling 2.0R Set, Array 2 (GPL4911) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1111 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3 (GPL4912) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1112 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P04R] Affymetrix Human Tiling 2.0R Set, Array 4 (GPL4913) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1113 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P05R] Affymetrix Human Tiling 2.0R Set, Array 5 (GPL4914) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1114 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1115 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1116 Growth Factor Stimulation Induces a Distinct ERα Cistrome Underlying Breast Cancer Endocrine Resistance (GSE26081) [Tiling Array] [Hs35b_P01R] Affymetrix Human Tiling 2.0R Set, Array 1 (GPL4910) Norris Cotton Cancer Center/Dartmouth Medical School 2010-12-15 Homo sapiens
Homo sapiens
5
(0 x 5)
5 by_platform
by_series
1117 Growth Factor Stimulation Induces a Distinct ERα Cistrome Underlying Breast Cancer Endocrine Resistance (GSE26081) [Tiling Array] [Hs35b_P02R] Affymetrix Human Tiling 2.0R Set, Array 2 (GPL4911) Norris Cotton Cancer Center/Dartmouth Medical School 2010-12-15 Homo sapiens
Homo sapiens
5
(0 x 5)
5 by_platform
by_series
1118 Growth Factor Stimulation Induces a Distinct ERα Cistrome Underlying Breast Cancer Endocrine Resistance (GSE26081) [Tiling Array] [Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3 (GPL4912) Norris Cotton Cancer Center/Dartmouth Medical School 2010-12-15 Homo sapiens
Homo sapiens
5
(0 x 5)
5 by_platform
by_series
1119 Growth Factor Stimulation Induces a Distinct ERα Cistrome Underlying Breast Cancer Endocrine Resistance (GSE26081) [Tiling Array] [Hs35b_P04R] Affymetrix Human Tiling 2.0R Set, Array 4 (GPL4913) Norris Cotton Cancer Center/Dartmouth Medical School 2010-12-15 Homo sapiens
Homo sapiens
5
(0 x 5)
5 by_platform
by_series
1120 Growth Factor Stimulation Induces a Distinct ERα Cistrome Underlying Breast Cancer Endocrine Resistance (GSE26081) [Tiling Array] [Hs35b_P05R] Affymetrix Human Tiling 2.0R Set, Array 5 (GPL4914) Norris Cotton Cancer Center/Dartmouth Medical School 2010-12-15 Homo sapiens
Homo sapiens
5
(0 x 5)
5 by_platform
by_series
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