Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,438)		   Primates
(205)		   Rodents
(12,530)		   Mammals
(774)		   Vertebrates
(1,152)		   Invertebrates
(3,917)		   Plants
(6,619)		   Bacteria
(2,962)		   Viruses
(50)		   Phages
(4)		   Unclassified
(282)		   All
(46,983)		  
  SAGE NlaIII
(77)		   SAGE RsaI
(0)		   SAGE Sau3A
(5)		   MPSS
(2)		   GeneChip
(7,280)		   Tiling Array
(1,347)		   cDNA Array
(1,902)		   Oligo Array
(4,280)		   Bead Array
(2,026)		   Protein Array
(0)		   Antibody
(35)		   RT-PCR
(138)		   HT-Seq
(1,264)		   Other
(81)		   All
(18,438)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
21 Expression and methylation analyses of HPV(-) and HPV(+) squamous cell carcinoma cell lines (GSE24091) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) University of Michigan 2010-09-12 Homo sapiens
Homo sapiens		 4
(0 x 4) 		1 3 by_platform
by_series
22 ChIP-chip for histone modifications in hESCs and differentiated hESCs (GSE30434) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) University of California, San Diego 2011-07-06 Homo sapiens
Homo sapiens		 4
(0 x 4) 		4 by_platform
by_series
23 The Androgen Receptor Modulates Expression of Genes with Critical Roles in Muscle Development and Function (GSE22076) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Pfizer 2010-06-01 Homo sapiens
Homo sapiens		 3
(0 x 3) 		3 by_platform
by_series
24 MYBL2/CREB1-Dependent Distinct FoxA1 Cistrome Directs G1/S Cell Cycle Progression in Androgen-Independent Prostate Cancer (GSE26329) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Baylor College of Medicine 2010-12-28 Homo sapiens
Homo sapiens		 3
(0 x 3) 		3 by_platform
by_series
25 ChIP-on-Chip data from Rh30 cells +/- rapamycin treatment (GSE15704) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Vanderbilt University Medical Center 2009-04-16 Homo sapiens
Homo sapiens		 2
(0 x 2) 		2 by_platform
by_series
26 p73 activity and rapamycin treatment: ChIP-on-Chip and gene expression profiling studies (GSE15719) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Vanderbilt University Medical Center 2009-04-17 Homo sapiens
Homo sapiens		 2
(0 x 2) 		2 by_platform
by_series
27 Genome-wide HIF-1 binding sites in HepG2 cells (GSE16347) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Dana-Farber Cancer Institute 2009-05-29 Homo sapiens
Homo sapiens		 2
(0 x 2) 		2 by_platform
by_series
28 Assessment of palindromes as platforms for DNA amplification in breast cancer (GSE29876) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Fred Hutchinson Cancer Research Center 2011-06-09 Homo sapiens
Homo sapiens		 2
(0 x 2) 		1 1 by_platform
by_series
29 Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line (GSE15220) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) NICHD 2009-03-13 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
30 Whole genome mapping of p73 binding sites in ME180 human cervical carcinoma cells (GSE18650) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) Harvard Medical School 2009-10-20 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
31 Genome wide FOXP3 binding sites in human cord blood derived CD4+CD25+ natural T regulatory cells (nTreg) (GSE20995) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) University Of Adelaide 2010-03-22 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
32 5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary (tiling array) (GSE40166) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) Centre for Addiction and Mental Health 2012-08-16 Homo sapiens
Homo sapiens		 84
(0 x 84) 		84 by_platform
by_series
33 5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary (GSE40167) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) Centre for Addiction and Mental Health 2012-08-16 Homo sapiens
Homo sapiens		 84
(0 x 84) 		84 by_platform
by_series
34 DNaseI sensitivity/hypersensitivity (GSE8222) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Washington 2007-06-21 Homo sapiens
Homo sapiens		 35
(0 x 35) 		6 5 4 4 16 by_platform
by_series
35 ChIP-chip of 38 nuclear receptors and NR co-factors in breast cancer cell line MCF7 (GSE41995) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Chicago IGSB 2012-11-01 Homo sapiens
Homo sapiens		 34
(0 x 34) 		34 by_platform
by_series
36 Methylome-wide comparison of human genomic DNA extracted from whole blood and from EBV-transformed lymphocyte cell lines (GSE35204) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) Virginia Commonwealth University 2012-01-18 Homo sapiens
Homo sapiens		 30
(0 x 30) 		30 by_platform
by_series
37 DNaseI sensitivity/hypersensitivity Part II (GSE7411) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Washington 2007-03-30 Homo sapiens
Homo sapiens		 24
(0 x 24) 		6 4 4 10 by_platform
by_series
38 Tissue/Cell DNaseI sensitivity/hypersensitivity screening II (GSE11298) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Washington 2008-04-29 Homo sapiens
Homo sapiens		 22
(0 x 22) 		6 3 10 3 by_platform
by_series
39 5-methylcytosine ChIP-on-Chip (MeDIP) of sporadic amyotrophic lateral sclerosis and control human brains (GSE12525) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Sydney 2008-08-22 Homo sapiens
Homo sapiens		 21
(0 x 21) 		20 1 by_platform
by_series
40 Genome-wide Binding Site Mapping of Retinoic Acid Receptors and Coregulators in Breast Cancer Cells (GSE15244) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) MD Anderson Cancer Center 2009-03-16 Homo sapiens
Homo sapiens		 18
(0 x 18) 		18 by_platform
by_series
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