Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,798)		   Primates
(133)		   Rodents
(5,546)		   Mammals
(406)		   Vertebrates
(547)		   Invertebrates
(1,922)		   Plants
(2,558)		   Bacteria
(1,515)		   Viruses
(10)		   Phages
(0)		   Unclassified
(130)		   All
(29,629)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(289)		   Tiling Array
(178)		   cDNA Array
(139)		   Oligo Array
(1,062)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(254)		   Other
(0)		   All
(1,922)		  
  brain
(140)		   blood
(21)		   connective
(18)		   reproductive
(33)		   muscular
(0)		   digestive
(80)		   liver
(0)		   lung
(0)		   urinary
(12)		   endo/exo-crine
(42)		   embryo
(44)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(96)		   unclassified
(1,436)		   all
(1,922)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1781 GSM441282 accessibility of S2 cells 0 FMI 2009-08-18 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster		 bone Chromatin accessibility in Kc cells as measured by MeDIP-footprint.
1782 GSM441283 H3K4me3 in Kc cells 0 FMI 2009-08-18 [Tiling Array] [Dm35b_MR] Affymetrix Drosophila Tiling 1.0R Array (GPL5919) genomic Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:3K4-ChIP DNA Input DNA title:H3K4me3 in Kc cells description:Tri-methylation of Lysine 4 of Histone H3 in Kc cells.
1783 GSM441284 H3K36me2 in Kc cells 0 FMI 2009-08-18 [Tiling Array] [Dm35b_MR] Affymetrix Drosophila Tiling 1.0R Array (GPL5919) genomic Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:2K36-ChIP DNA Input DNA title:H3K36me2 in Kc cells description:Di-methylation of Lysine 36 of Histone H3 in Kc cells.
1784 GSM441285 H3K36me3 in Kc cells 0 FMI 2009-08-18 [Tiling Array] [Dm35b_MR] Affymetrix Drosophila Tiling 1.0R Array (GPL5919) genomic Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:3K36-ChIP DNA Input DNA title:H3K36me3 in Kc cells description:Tri-methylation of Lysine 36 of Histone H3 in Kc cells.
1785 GSM441286 H3K27me3 in Kc cells 0 FMI 2009-08-18 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:3K27-ChIP DNA Input DNA title:H3K27me3 in Kc cells description:Tri-methylation of Lysine 27 of Histone H3 in Kc cells.
1786 GSM441287 H3K9me2 in Kc cells 0 FMI 2009-08-18 [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) genomic Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:2K9-ChIP DNA Input DNA title:H3K9me2 in Kc cells description:Di-methylation of Lysine 9 of Histone H3 in Kc cells.
1787 GSM442605 MSL3-TAP ChIP-seq 0 Harvard Medical School 2009-08-19 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:larvae title:MSL3-TAP ChIP-seq description:MSL3-TAP ChIP of TrojantElephant mutant larvae
1788 GSM442606 input 0 Harvard Medical School 2009-08-19 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:larvae title:input description:chromatin input of TrojantElephant mutant larvae
1789 GSM447608 H3K27Ac_s6_ChIPSeq_1 0 The University of Chicago 2009-09-01 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:L2 title:H3K27Ac_s6_ChIPSeq_1 description:corresponding input record: GSM400669
1790 GSM449725 Whole body_primary results 0 Southwest University 2009-09-04 [HT Sequencing] Illumina Genome Analyzer II (Bombyx mori) (GPL9151) SRA Bombyx mori
Bombyx mori		 pooled whole silkworm body (whole body)
1791 GSM449726 Anterior silkgland_primary results 0 Southwest University 2009-09-04 [HT Sequencing] Illumina Genome Analyzer II (Bombyx mori) (GPL9151) SRA Bombyx mori
Bombyx mori		 breast anterior silk glands
1792 GSM449727 Posterior silkgland_primary results 0 Southwest University 2009-09-04 [HT Sequencing] Illumina Genome Analyzer II (Bombyx mori) (GPL9151) SRA Bombyx mori
Bombyx mori		 breast posterior silk glands
1793 GSM450972 BG3 small RNAs BioRep-1 TechRep-1 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:BG3 title:BG3 small RNAs BioRep-1 TechRep-1 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1794 GSM450973 BG3 small RNAs BioRep-2 TechRep-1 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:BG3 title:BG3 small RNAs BioRep-2 TechRep-1 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1795 GSM450974 BG3 small RNAs BioRep-2 TechRep-2 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:BG3 title:BG3 small RNAs BioRep-2 TechRep-2 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1796 GSM451031 Cl.8 small RNAs BioRep-1 TechRep-1 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:Cl.8 title:Cl.8 small RNAs BioRep-1 TechRep-1 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1797 GSM451032 Cl.8 small RNAs BioRep-1 TechRep-2 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:Cl.8 title:Cl.8 small RNAs BioRep-1 TechRep-2 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1798 GSM451033 Cl.8 small RNAs BioRep-1 TechRep-3 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:Cl.8 title:Cl.8 small RNAs BioRep-1 TechRep-3 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1799 GSM451034 Cl.8 small RNAs BioRep-2 TechRep-1 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:Cl.8 title:Cl.8 small RNAs BioRep-2 TechRep-1 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
1800 GSM451035 Cl.8 small RNAs BioRep-2 TechRep-2 0 Cold Spring Harbor Labs 2009-09-09 [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) SRA Drosophila melanogaster
Drosophila melanogaster		 unclassified source_name:Cl.8 title:Cl.8 small RNAs BioRep-2 TechRep-2 description:20-200 ntds RNA Seq RNAs 20-200 n'tds Stranded, single-ended, 5' bias
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