Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(12)
  Tiling Array
(3)
  cDNA Array
(6)
  Oligo Array
(11)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(6)
  Other
(0)
  All
(39)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
21 differential gene expression in Sensitive and Resistant Pig to Escherichia coli F18 (GSE26854) [cDNA Array] Agilent-020109 Porcine Gene Expression Microarray (44K) (Probe Name version) (GPL10162) Yangzhou university 2011-01-25 Sus scrofa
Sus scrofa domestica
348,824
(43,603 x 8)
8 by_platform
by_series
22 Expression data of Sham and post-MI myocardium from swine (GSE27962) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) VU University Medical Center 2011-03-15 Sus scrofa
Sus scrofa domestica
385,968
(24,123 x 16)
16 by_platform
by_series
23 The Adaptive Response of Endothelial Cells to Increased Shear Stress (GSE26505) [Oligo Array] Duke Operon Porcine 10.5K Oligo Array (GPL3461) Duke University 2011-01-07 Sus scrofa
Sus scrofa domestica
427,080
(10,677 x 40)
40 by_platform
by_series
24 Role of enterotoxins in the induction of early immune responses and small-intestinal secretion in ETEC-infected piglets (GSE28003) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Flanders Institute for Biotechnology (VIB) 2011-03-17 Sus scrofa
Sus scrofa domestica
434,214
(24,123 x 18)
6 12 by_platform
by_series
25 Peripheral blood transcriptome responses to Salmonella Typhimurium in pigs differing in Salmonella shedding phenotypes (GSE27000) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Iowa State University 2011-02-01 Sus scrofa
Sus scrofa domestica
482,460
(24,123 x 20)
20 by_platform
by_series
26 PDE-4 inhibition alters gene expression and improves INH-mediated clearance of Mtb in rabbit lungs (GSE27992) [Oligo Array] Agilent-020908 Oryctolagus cuniculus (Rabbit) Oligo Microarray (Probe Name version) (GPL13288) Public Health Research Institute at UMDNJ 2011-03-16 Oryctolagus cuniculus
Oryctolagus cuniculus
523,548
(43,629 x 12)
12 by_platform
by_series
27 Genetic variability of transcript abundance in pig peri-mortem skeletal muscle: eQTL localized genes involved in stress response, cell death, muscle disorders and metabolism. (GSE26924) [cDNA Array] AGENAE_PigGeneric2_9216 (GPL3729) INRA 2011-01-28 Sus scrofa
Sus scrofa domestica
525,312
(9,216 x 57)
57 by_platform
by_series
28 Dose dependent response of liver gene expression and lipoperoxidation to dietary long chain omega 3 PUFA (GSE27621) [Oligo Array] Agilent-020908 Oryctolagus cuniculus (Rabbit) Oligo Microarray (Feature Number version) (GPL7083) AgResearch NZ 2011-03-01 Oryctolagus cuniculus
Oryctolagus cuniculus
542,640
(45,220 x 12)
12 by_platform
by_series
29 Gene expression in a porcine preadipocyte cell line during differentiation (GSE26907) [Oligo Array] AGP Porcine 44K oligo array v2 AGPOA2 (GPL11664) National Institute of Agrobiological Sciences 2011-01-27 Sus scrofa
Sus scrofa domestica
576,996
(27,476 x 21)
21 by_platform
by_series
30 Pig Longissimus muscle: comparison between Basque and Large White breeds (GSE26614) [Oligo Array] [Agilent-019442] Agilent/INRA FH Sus scrofa 15K muscle array [Probe Name version] (GPL11445) INRA 2011-01-13 Sus scrofa
Sus scrofa domestica
608,320
(15,208 x 40)
40 by_platform
by_series
31 Molecular Characterization of In Vivo Adjuvant Activity in Ferrets Vaccinated against Influenza Virus (GSE27248) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) Toronto General Research Institute 2011-02-11 Mustela putorius furo
Mustela putorius furo
688,560
(43,035 x 16)
16 by_platform
by_series
32 Consequences of conceptus exposure to colony stimulating factor 2 on survival, elongation, interferon-{tau} secretion and gene expression (GSE26842) [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Probe Name version) (GPL11649) University of Florida 2011-01-24 Bos taurus
Bos taurus
699,408
(43,713 x 16)
16 by_platform
by_series
33 Impact of exercise training on endothelial transcriptional profiles in healthy swine: A genome-wide microarray analysis (GSE26663) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) University of Missouri 2011-01-18 Sus scrofa
Sus scrofa domestica
699,567
(24,123 x 29)
29 by_platform
by_series
34 The persistent milk yield response to frequent milking during early lactation is associated with persistent changes in mammary gene expression. (GSE27851) [GeneChip] [Bovine] Affymetrix Bovine Genome Array (GPL2112) University of Vermont 2011-03-09 Bos taurus
Bos taurus
868,608
(24,128 x 36)
36 by_platform
by_series
35 Identification of the 3' end of the pig miRNA by the RAKE technology [platform 1: 9003467] (GSE28137) [Tiling Array] CRIBI Tiling array for the identification of 3' end of pig miRNAs (platform 1) (GPL13319) University of Padova 2011-03-23 Sus scrofa
Sus scrofa domestica
1,139,136
(94,928 x 12)
12 by_platform
by_series
36 Identification of the 3' end of the pig miRNA by the RAKE technology [platform 2: 9003179] (GSE28138) [Tiling Array] CRIBI Tiling array for the identification of 3' end of pig miRNAs (platform 2) (GPL13320) University of Padova 2011-03-23 Sus scrofa
Sus scrofa domestica
1,139,136
(94,928 x 12)
12 by_platform
by_series
37 Pathology and Protective Immune Response in Pigs Infected with Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) of High and Low Virulence (GSE26642) [Oligo Array] Swine Protein-Annotated Oligonucleotide Microarray (GPL7435) Michigan State University 2011-01-14 Sus scrofa
Sus scrofa domestica
1,451,520
(20,736 x 70)
34 36 by_platform
by_series
38 Canine osteosarcoma cell lines and tissues (GSE27217) [GeneChip] [Canine_2] Affymetrix Canine Genome 2.0 Array (GPL3738) University of Minnesota 2011-02-10 Canis lupus familiaris
Canis lupus familiaris
1,463,190
(43,035 x 34)
34 by_platform
by_series
39 Messenger RNA transcript expression in the pig (S. scrofa) (GSE27853) [Oligo Array] CRIBI pig mRNA expression array [Ensembl (Ver. 56) and UniGene (Ver. 38)] (averaged probe version) (GPL13259) University of Padova 2011-03-09 Sus scrofa
Sus scrofa domestica
1,706,124
(60,933 x 28)
8 6 6 2 2 2 2 by_platform
by_series
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