Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(31)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(47)
  GeneChip
(1,712)
  Tiling Array
(694)
  cDNA Array
(1,562)
  Oligo Array
(1,630)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(777)
  Other
(18)
  All
(6,479)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
581 Small RNAs generated in vitro by budding-yeast Dicer (GSE29168) [HT Sequencing] Illumina Genome Analyzer (Vanderwaltozyma polyspora) (GPL9132) Whitehead Institute for Biomedical Research 2011-05-10 Vanderwaltozyma polyspora
Vanderwaltozyma polyspora
2
(0 x 2)
2 by_platform
by_series
582 High through put screen of small RNA in parental, hybrid and allopolyploid wheat (GSE29243) [HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467) The Weizmann Institute of Science 2011-05-12 Triticum aestivum
Triticum aestivum
2
(0 x 2)
2 by_platform
by_series
583 Cassava sRNA libraries from non-infected and infected tissues with Xanthomonas axonopodis. pv manihotis (GSE29379) [HT Sequencing] Illumina Genome Analyzer IIx (Manihot esculenta) (GPL13617) Universidad Nacional de Colombia 2011-05-18 Manihot esculenta
Manihot esculenta
2
(0 x 2)
2 by_platform
by_series
584 Cis- and trans- regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids (GSE29687) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis arenosa x Arabidopsis thaliana) (GPL13677) The University of Texas at Austin 2011-06-02 Arabidopsis arenosa x Arabidopsis thaliana
Arabidopsis arenosa x Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
585 mRNA-Seq of central cells from the Arabidopsis thaliana female gametophyte (GSE29719) [HT Sequencing] AB SOLiD System 3.0 (Arabidopsis thaliana) (GPL10088) University of Zürich 2011-06-03 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
586 Aspergillus flavus transcriptome under different temperature conditions (GSE30031) [HT Sequencing] Illumina Genome Analyzer II (Aspergillus flavus) (GPL13733) JCVI 2011-06-16 Aspergillus flavus
Aspergillus flavus
2
(0 x 2)
2 by_platform
by_series
587 Comparison of transcript abundance in mycelium from the rice blast fungus Magnaporthe oryzae grown in rich medium and in minimal medium using RNA-Seq (GSE30327) [HT Sequencing] Illumina Genome Analyzer (Magnaporthe oryzae) (GPL13743) University of Exeter 2011-06-30 Magnaporthe oryzae
Magnaporthe oryzae
2
(0 x 2)
2 by_platform
by_series
588 Budding yeast mRNA poly(A) site mapping (GSE30703) [HT Sequencing] Illumina Genome Analyzer IIx (Saccharomyces cerevisiae) (GPL13272) U. Colorado School of Medicine 2011-07-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
589 Budding yeast mRNA export and processing factors (GSE30706) [HT Sequencing] Illumina Genome Analyzer IIx (Saccharomyces cerevisiae) (GPL13272) U. Colorado School of Medicine 2011-07-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
590 ChIP-Seq data from Arabidopsis thaliana under dark and far-red light (GSE30711) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Beijing Forestry University 2011-07-15 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
591 Genome-wide Binding Site Analysis of FAR-RED ELONGATED HYPOCOTYL 3 Reveals Its Novel Function in Arabidopsis Development (GSE30713) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Beijing Forestry University 2011-07-15 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
592 RNAi promotes heterochromatic silencing through replication-coupled release of RNA pol II (RNA seq) (GSE30827) [HT Sequencing] Illumina Genome Analyzer (Schizosaccharomyces pombe) (GPL9854) Cold Spring Harbor Laboratory 2011-07-20 Schizosaccharomyces pombe
Schizosaccharomyces pombe
2
(0 x 2)
2 by_platform
by_series
593 RNAi promotes heterochromatic silencing through replication-coupled release of RNA pol II (superseries) (GSE30837) [HT Sequencing] Illumina Genome Analyzer (Schizosaccharomyces pombe) (GPL9854) Cold Spring Harbor Laboratory 2011-07-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe
2
(0 x 2)
2 by_platform
by_series
594 miRNAs target conserved motifs of diverse genes encoding NB-LRRs to trigger trans-acting siRNAs in legumes. (GSE31061) [HT Sequencing] Illumina Genome Analyzer II (Arachis hypogaea) (GPL13999) University of Delaware 2011-07-29 Arachis hypogaea
Arachis hypogaea
2
(0 x 2)
1 1 by_platform
by_series
595 Small RNAs in S. cerevisiae reconstituted with RNAi (GSE31290) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) Whitehead Institute for Biomedical Research 2011-08-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
596 Targets of Ty3 transposition in Saccharomyces cerevisiae (GSE31820) [HT Sequencing] Illumina Genome Analyzer IIx (Saccharomyces cerevisiae) (GPL13272) University of CA, Irvine 2011-09-01 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
597 Bisulfite Sequencing Reveals that Aspergillus flavus Holds A Hollow in DNA Methylation (GSE32177) [HT Sequencing] Illumina Genome Analyzer II (Aspergillus flavus) (GPL13733) Sun Yat-sen University 2011-09-16 Aspergillus flavus
Aspergillus flavus
2
(0 x 2)
2 by_platform
by_series
598 2-week-old Arabidopsis seedlings (Columbia ecotype) (GSE32318) [HT Sequencing] Illumina Genome Analyzer II (Arabidopsis thaliana) (GPL9302) Colorado State University 2011-09-22 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
599 Cross species differential gene expression (GSE32679) [HT Sequencing] AB SOLiD System 2.0 (Saccharomyces cerevisiae S288c) (GPL14682) Boston College 2011-10-06 Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
2
(0 x 2)
2 by_platform
by_series
600 Cross species differential gene expression (GSE32679) [HT Sequencing] AB SOLiD System 2.0 (Saccharomyces paradoxus NRRL Y-17217) (GPL14683) Boston College 2011-10-06 Saccharomyces paradoxus NRRL Y-17217
Saccharomyces paradoxus NRRL Y-17217
2
(0 x 2)
2 by_platform
by_series
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