Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(47)		   GeneChip
(1,712)		   Tiling Array
(694)		   cDNA Array
(1,562)		   Oligo Array
(1,630)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(777)		   Other
(18)		   All
(6,479)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 Comparison of expression in Arabidopsis mutant tdt-1 and wild type (GSE7359) [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) University of Utah 2007-03-23 Arabidopsis thaliana
Arabidopsis thaliana		 132,870
(44,290 x 3) 		3 by_platform
by_series
42 35S:AtIBH1-SRDX Arabidopsis vs. wild type (GSE35098) [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) National Institute of Advanced Industrial Science and Technology 2012-01-13 Arabidopsis thaliana
Arabidopsis thaliana		 112,659
(37,553 x 3) 		3 by_platform
by_series
43 Assessing global transcriptomic changes in response to South African cassava mosaic virus [ZA-99] infection in susceptible Arabidopsis thaliana (GSE43282) [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) University of the Witswatersrand 2013-01-04 Arabidopsis thaliana
Arabidopsis thaliana		 112,659
(37,553 x 3) 		3 by_platform
by_series
44 Small RNAs in rice seed (GSE11974) [MPSS] IPPE Rice MPSS (GPL7013) Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2008-07-02 Oryza sativa
Oryza sativa		 111,161
(111,161 x 1) 		1 by_platform
by_series
45 Arabidopsis thaliana open flowers: Wild type vs. sdg4 mutant (SALK T-DNA line_128444) (GSE9543) [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RIKEN 2007-11-07 Arabidopsis thaliana
Arabidopsis thaliana		 90,440
(45,220 x 2) 		2 by_platform
by_series
46 Comparison of the transcriptomes of hmgb1 vs Col-0 (GSE10638) [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) Flanders Institute for Biotechnology (VIB) 2008-02-26 Arabidopsis thaliana
Arabidopsis thaliana		 45,220
(45,220 x 1) 		1 by_platform
by_series
47 Comparison of the transcriptomes of tfIIs vs Col-0 (GSE10663) [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) Flanders Institute for Biotechnology (VIB) 2008-02-28 Arabidopsis thaliana
Arabidopsis thaliana		 45,220
(45,220 x 1) 		1 by_platform
by_series
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