Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 87648 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 87648 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 87648 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 87648 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 87648 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 87648 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57
RSS
Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(31)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(47)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(18)
  All
(6,479)
 
[1]      «      3   |   4   |   5   |   6   |   7      »      [324]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
81 Genomic DNA 1:1 mixtures in Allele Specific Expression study (GSE16505) [Tiling Array] Arabidopsis thaliana SNP-tiling array AtSNPtile ver. 1 (GPL8655) University of Chicago 2009-06-08 Arabidopsis thaliana
Arabidopsis thaliana
9,737,124
(2,434,281 x 4)
4 by_platform
by_series
82 Transcriptomic analysis of rice (GSE21494) [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) National Institute of Agrobiological Sciences 2010-04-23 Oryza sativa Japonica Group
Oryza sativa Japonica Group
9,450,980
(45,220 x 209)
108 12 38 51 by_platform
by_series
83 Global mapping of epigenetic modifications of histone H3 Lysine 4 di- and trimethylation in Rice (GSE9925) [Oligo Array] Yale University MCDB Rice japonica NimbleGen 390K Oligo Array for H3K4Me2 and H3K4Me3 version1 (GPL6286) Yale University 2007-12-17 Oryza sativa
Oryza sativa
9,329,616
(388,734 x 24)
12 12 by_platform
by_series
84 affy_sunyfuel_drought_sunflower-Sunyfuel (GSE25719) [GeneChip] [SYNG010s520477] Affymetrix Helianthus annuus 94K (GPL10568) INRA 2010-11-30 Helianthus annuus
Helianthus annuus
9,090,336
(94,691 x 96)
96 by_platform
by_series
85 Differential transcriptome analyses of three wheat genotypes in their response to Fusarium Head Blight and trichothecenes (GSE28973) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) Agriculture and Agri-Foods Canada 2011-04-29 Triticum aestivum
Triticum aestivum
8,825,760
(61,290 x 144)
144 by_platform
by_series
86 Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis (GSE36515) [Tiling Array] Custom NimbleGen A. thaliana ChIP-chip tiling array [HD2.3X] (GPL11005) IBENS 2012-03-14 Arabidopsis thaliana
Arabidopsis thaliana
8,535,840
(711,320 x 12)
12 by_platform
by_series
87 Gene expression dynamics in yeast BY4741 and a strain lacking MSN2 and MSN4 responding to 0.4mM H2O2 over time (0-60min) (GSE30899) [Tiling Array] UW-Madison Saccharomyces cerevisiae 380K tiling array 51mer oligos 2006-10-12 (GPL9529) University of Wisconsin-Madison 2011-07-25 Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
8,357,272
(379,876 x 22)
22 by_platform
by_series
88 Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks (GSE12212) [Tiling Array] FHCRC Arabidopsis Tiling Array (GPL3371) Fred Hutchinson Cancer Research Center 2008-07-23 Arabidopsis thaliana
Arabidopsis thaliana
8,211,315
(391,015 x 21)
4 17 by_platform
by_series
89 Determination of ncRNAs repressed by Isw2 (GSE23108) [Oligo Array] NimbleGen Saccharomyces cerevisiae 2007-09-04_SGD1_TT_ChIP (GPL10725) Fred Hutchinson Cancer Research Center 2010-07-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae
8,085,042
(385,002 x 21)
21 by_platform
by_series
90 Genome wide profiling of H3K9me2 in Arabidopsis thaliana (GSE12383) [Oligo Array] Nimblegen_HD2_Arabidopsis (GPL7143) University of California, Los Angeles 2008-08-07 Arabidopsis thaliana
Arabidopsis thaliana
8,006,740
(2,001,685 x 4)
4 by_platform
by_series
91 MeDIP-chip of zdp mutant (GSE33719) [Oligo Array] Nimblegen_HD2_Arabidopsis (GPL7143) Purdue University 2011-11-15 Arabidopsis thaliana
Arabidopsis thaliana
8,006,740
(2,001,685 x 4)
4 by_platform
by_series
92 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance (GSE7124) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Virginia Tech 2007-02-23 Glycine max,Phytophthora sojae
Glycine max,Phytophthora sojae
7,829,760
(61,170 x 128)
128 by_platform
by_series
93 A Universal RNA Polymerase II CTD Cycle Is Orchestrated by Complex Interplays Between Kinase, Phosphatase and Isomerase Enzymes Along Genes (GSE29403) [Oligo Array] Agilent-014810 Yeast Whole Genome ChIP-on-Chip Microarray 4x44K (G4493A) (GPL4131) IRCM 2011-05-19 Saccharomyces cerevisiae
Saccharomyces cerevisiae
7,823,060
(45,220 x 173)
16 157 by_platform
by_series
94 Chromosome length influences replication-induced topological stress (GSE26263) [GeneChip] Shirahige S.cerevisiae Tiling1.0F Array (GPL3723) The University of Tokyo 2010-12-22 Saccharomyces cerevisiae
Saccharomyces cerevisiae
7,746,900
(227,850 x 34)
34 by_platform
by_series
95 Soybean fast neutron genotyping: 700k Reverse genetics (GSE31111) [Oligo Array] NimbleGen Soybean 700K CGH array (design 091113_Gmax_RS_CGH_HX3) (GPL11198) University of Minnesota 2011-08-01 Glycine max
Glycine max
7,657,529
(696,139 x 11)
11 by_platform
by_series
96 Gene expression biomarkers provide sensitive indicators of in planta nitrogen status in Maize (GSE32361) [GeneChip] Affymetrix Zea mays A1ZMa520113 (GPL14616) Monsanto Co. 2011-09-24 Zea mays
Zea mays
7,582,140
(84,246 x 90)
90 by_platform
by_series
97 Gene expression data from isolated white winter wheat embryos at physiological maturity, environment 2 of 2. (GSE35407) [Oligo Array] FGAS/USDA/ACPFG-Wheat-17K-v1.0 (GPL15156) Cornell University 2012-01-30 Triticum aestivum
Triticum aestivum
7,475,328
(36,288 x 206)
206 by_platform
by_series
98 Comprehensive molecular characterization of the soybean rust disease [Embrapa-Soja - Iowa State Univ; 2005] (GSE33410) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Iowa State University 2011-11-02 Glycine max
Glycine max
7,340,400
(61,170 x 120)
120 by_platform
by_series
99 Expression profiling of yeast kinase and phosphatase knockouts (GSE25644) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2010-11-29 Saccharomyces cerevisiae
Saccharomyces cerevisiae
7,216,128
(15,552 x 464)
318 146 by_platform
by_series
100 Expression analysis of RCc3:OsNAC10 and GOS2:OsNAC10 transgenic rice plants (GSE31858) [Tiling Array] Rice NimbleGen 390K tiling array (2006-11-14_ggb_rap1_3tile_101706) (GPL7344) Myongji University 2011-09-02 Oryza sativa
Oryza sativa
7,034,598
(390,811 x 18)
9 9 by_platform
by_series
[1]      «      3   |   4   |   5   |   6   |   7      »      [324]