Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,438)		   Primates
(205)		   Rodents
(12,530)		   Mammals
(774)		   Vertebrates
(1,152)		   Invertebrates
(3,917)		   Plants
(6,619)		   Bacteria
(2,962)		   Viruses
(50)		   Phages
(4)		   Unclassified
(282)		   All
(46,983)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(47)		   GeneChip
(1,725)		   Tiling Array
(706)		   cDNA Array
(1,589)		   Oligo Array
(1,691)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(804)		   Other
(18)		   All
(6,619)		  
1   |   2   |   3   |   4   |   5      »      [331]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Whole-Genome Analysis of SSB Larvae Infestation Regulated Rice Genes (GSE28012) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Zhejiang University, Institute of Insect Science 2011-03-17 Oryza sativa
Oryza sativa		 172,143
(57,381 x 3) 		3 by_platform
by_series
2 Using Model Organism Saccharomyces Cerevisiae to Evaluate the Differential Effects of ELF-MF and RF-EMF exposure on Global Gene Expression (GSE27308) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Zhejiang University 2011-02-14 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 74,680
(9,335 x 8) 		8 by_platform
by_series
3 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication [small RNA] (GSE39308) [HT Sequencing] Illumina HiSeq 2000 (Oryza rufipogon) (GPL15800) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon		 3
(0 x 3) 		1 2 by_platform
by_series
4 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication (GSE39309) [HT Sequencing] Illumina HiSeq 2000 (Oryza rufipogon) (GPL15800) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon		 3
(0 x 3) 		1 2 by_platform
by_series
5 Bbssk1 dependent gene expression in Beauveria bassiana (GSE40229) [HT Sequencing] Illumina HiSeq 2000 (Beauveria bassiana ARSEF 2860) (GPL15963) Zhejiang University 2012-08-20 Beauveria bassiana ARSEF 2860
Beauveria bassiana ARSEF 2860		 2
(0 x 2) 		2 by_platform
by_series
6 Regulation of root hair development in Arabidopsis thaliana (L.) Heynh. by magnesium is involved in calcium and reactive oxygen species (GSE42899) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) Zhejiang University 2012-12-13 Arabidopsis thaliana
Arabidopsis thaliana		 2
(0 x 2) 		2 by_platform
by_series
7 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication [degradome] (GSE39307) [HT Sequencing] Illumina Genome Analyzer (Oryza rufipogon) (GPL10246) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon		 1
(0 x 1) 		1 by_platform
by_series
8 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication (GSE39309) [HT Sequencing] Illumina Genome Analyzer (Oryza rufipogon) (GPL10246) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon		 1
(0 x 1) 		1 by_platform
by_series
9 Expression data from infected (Xanthomonas oryzae pv. Oryzae (P10)) leaf in japonica rice (cv. Y73) (GSE36093) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Zhejiang Academy of Agricultural Sciences 2012-02-27 Oryza sativa
Oryza sativa		 344,286
(57,381 x 6) 		6 by_platform
by_series
10 Expression data from OsRP1L1-overexpressing plant leaf in japonica rice (cv. Ishikari-shiroge (I-S)) (GSE39767) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Zhejiang Academy of Agricultural Sciences 2012-07-31 Oryza sativa Japonica Group
Oryza sativa Japonica Group		 344,286
(57,381 x 6) 		6 by_platform
by_series
11 Comparsion of gene expression profile in polaris (pola) mutant lines and its POLARIS (POLA) wild-type at meiotic and ripening stages (GSE25693) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Yunnan Agricultural University 2010-11-29 Oryza sativa Japonica Group
Oryza sativa Japonica Group		 229,524
(57,381 x 4) 		4 by_platform
by_series
12 Remodeling of global transcription patterns of C. neoformans genes mediated by stress-activated HOG signaling pathways (GSE16692) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2009-06-17 Cryptococcus neoformans var. grubii
Cryptococcus neoformans var. grubii		 844,800
(8,448 x 100) 		100 by_platform
by_series
13 Flucytosine-responsive APSES proteins, Msa1 and Mbs1, play pleiotropic roles in stress response, differentiation, and virulence of Cryptococcus neoformans (GSE30158) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2011-06-22 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 253,440
(8,448 x 30) 		30 by_platform
by_series
14 Toc1, Toc2, and Skn7 null mutants treated with Flucytosine (GSE30154) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2011-06-22 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 202,752
(8,448 x 24) 		24 by_platform
by_series
15 Molecular and Functional Characterization of the role of RNA silencing components in Cryptococcus neoformans (GSE21178) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2010-04-02 Cryptococcus neoformans var. neoformans JEC21
Cryptococcus neoformans var. neoformans JEC21		 185,856
(8,448 x 22) 		22 by_platform
by_series
16 The role of the Ras- and cAMP-signaling pathways in stress response and sterol biosynthesis in Cryptococcus neoformans (GSE17338) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2009-07-27 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 152,064
(8,448 x 18) 		18 by_platform
by_series
17 Comparative transcriptome analysis of the CO2 sensing pathway via differential expressions of carbonic anhydrase in Cryptococcus neoformans (GSE21192) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2010-04-04 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 143,616
(8,448 x 17) 		17 by_platform
by_series
18 Molecular and Functional Characterization of the role of RNA silencing components in Cryptococcus neoformans [RNAi_Serotype A] (GSE21176) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2010-04-02 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 135,168
(8,448 x 16) 		16 by_platform
by_series
19 Global transcriptome analysis of eukaryotic genes affected by Gromwell extract (GSE43370) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2013-01-09 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 101,376
(8,448 x 12) 		12 by_platform
by_series
20 A flucytosine-responsive APSES protein, Mbs1, plays pleiotropic roles in stress response, differentiation, and virulence of Cryptococcus neoformans (GSE30156) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2011-06-22 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 76,032
(8,448 x 9) 		9 by_platform
by_series
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