Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(33)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(58)
  GeneChip
(1,932)
  Tiling Array
(758)
  cDNA Array
(1,617)
  Oligo Array
(2,013)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(1)
  HT-Seq
(1,165)
  Other
(20)
  All
(7,611)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
5481 Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mRNA splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation (GSE26398) [Oligo Array] CapitalBio 29k Arabidopsis Genome Array (GPL11375) Institute of Genetics and Developmental Biology, Chinese Academy of sciences 2011-01-03 Arabidopsis thaliana
Arabidopsis thaliana
187,200
(31,200 x 6)
6 by_platform
by_series
5482 Genome-wide gene expression profiling of rice Zhonghua11 and ila1 lamina joint (GSE33361) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Institute of Genetics and Developmental Biology, CAS 2011-11-01 Oryza sativa Japonica Group
Oryza sativa Japonica Group
229,524
(57,381 x 4)
4 by_platform
by_series
5483 Differential gene expression in ref6-1 (GSE25444) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Institute of Genetics and Developmental Biology, CAS 2010-11-17 Arabidopsis thaliana
Arabidopsis thaliana
91,240
(22,810 x 4)
4 by_platform
by_series
5484 Jumonji C domain-containing protein 12 is a Histone H3 Lysine 27 Demethylase (GSE25447) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Institute of Genetics and Developmental Biology, CAS 2010-11-17 Arabidopsis thaliana
Arabidopsis thaliana
91,240
(22,810 x 4)
4 by_platform
by_series
5485 Genome-wide comparison of H3K27me3 difference between ref6-1 and wild type Col (GSE25446) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) Institute of Genetics and Developmental Biology, CAS 2010-11-17 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
5486 Jumonji C domain-containing protein 12 is a Histone H3 Lysine 27 Demethylase (GSE25447) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) Institute of Genetics and Developmental Biology, CAS 2010-11-17 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
5487 Genome-wide gene expression profiling of rice stigma (GSE7951) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences 2007-05-29 Oryza sativa
Oryza sativa
745,953
(57,381 x 13)
1 1 4 3 4 by_platform
by_series
5488 Genome-wide gene expression of rice cultivar Gui-630 (Indica) X Taiwanjing (Japonica) and mutant lemmata (lem) panicle (GSE20522) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences 2010-02-24 Oryza sativa
Oryza sativa
344,286
(57,381 x 6)
6 by_platform
by_series
5489 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle (GSE17194) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences 2009-07-20 Oryza sativa
Oryza sativa
229,524
(57,381 x 4)
4 by_platform
by_series
5490 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress. (GSE10643) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences 2008-02-26 Arabidopsis thaliana
Arabidopsis thaliana
182,480
(22,810 x 8)
8 by_platform
by_series
5491 DCL4-Dependent Clusters of PhasiRNAs in Rice. (GSE22763) [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) Institute of Genetics and Developmental Biology 2010-07-06 Oryza sativa
Oryza sativa
6
(0 x 6)
3 3 by_platform
by_series
5492 Roles of RDR701 and DCLs in Rice PhasiRNA biogenesis (GSE26405) [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) Institute of Genetics and Developmental Biology 2011-01-03 Oryza sativa
Oryza sativa
4
(0 x 4)
4 by_platform
by_series
5493 OsJMJ703, a Histone H3K4 Demethylase, Controls Transposon Activity in Rice (GSE41183) [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa) (GPL9316) Institute of Genetics and Developmental Biology 2012-09-27 Oryza sativa
Oryza sativa
4
(0 x 4)
4 by_platform
by_series
5494 Control of agricultural traits by hc-siRNA associated MITEs in rice (GSE50778) [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) Institute of Genetics and Developmental Biology 2013-09-11 Oryza sativa
Oryza sativa
3
(0 x 3)
3 by_platform
by_series
5495 Protein arginine methyltransferase AtPRMT5 is involved in pre-mRNA splicing in Arabidopsis thaliana (GSE21323) [HT Sequencing] AB SOLiD System 2.0 (Arabidopsis thaliana) (GPL10272) Institute of Genetics and Developmental Biology 2010-04-13 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
5496 NOT2 proteins promote Pol II-dependent transcription and interact with multiple miRNA biogenesis factors in Arabidopsis (GSE42901) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Institute of Genetics and Developmental Biology 2012-12-13 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
5497 Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica) (GSE19050) [HT Sequencing] Illumina Genome Analyzer (Oryza sativa Indica Group) (GPL9726) Institute of Genetics and Developmental Biology 2009-11-17 Oryza sativa Indica Group
Oryza sativa Indica Group
1
(0 x 1)
1 by_platform
by_series
5498 Replication origin selection organizes meiotic recombination (GSE53921) [Oligo Array] Agilent-015424 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version - A_86_Pnnnn probes) (GPL16383) Institute of Genetics and Development of Rennes 2014-01-08 Schizosaccharomyces pombe
Schizosaccharomyces pombe
1,622,866
(42,707 x 38)
38 by_platform
by_series
5499 Replication origin mapping of mitotic and meiotic cells in different conditions (GSE53879) [Oligo Array] Agilent-015424 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version - A_86_Pnnnn probes) (GPL16383) Institute of Genetics and Development of Rennes 2014-01-07 Schizosaccharomyces pombe
Schizosaccharomyces pombe
939,554
(42,707 x 22)
22 by_platform
by_series
5500 Localization of histone H3 and histone H3 lysine 4 trimethylation at the start of pre-meiotic S phase (GSE53878) [Oligo Array] Agilent-015424 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version - A_86_Pnnnn probes) (GPL16383) Institute of Genetics and Development of Rennes 2014-01-07 Schizosaccharomyces pombe
Schizosaccharomyces pombe
341,656
(42,707 x 8)
8 by_platform
by_series
[1]      «      273   |   274   |   275   |   276   |   277      »      [381]