Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(47)		   GeneChip
(1,712)		   Tiling Array
(694)		   cDNA Array
(1,562)		   Oligo Array
(1,630)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(777)		   Other
(18)		   All
(6,479)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
5481 Gene expression in S1 panicles of Ubi1:AtJMT transgenic plants and drought-treated nontransgenic rice plants (GSE14508) [Tiling Array] Rice NimbleGen 390K tiling array (2006-11-14_ggb_rap1_3tile_101706) (GPL7344) GGBIO 2009-01-22 Oryza sativa
Oryza sativa		 4,689,732
(390,811 x 12) 		12 by_platform
by_series
5482 Global transcriptome analysis of tarani (tni) (GSE38111) [Oligo Array] Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Probe Name version) (GPL12621) Genotypic Technology 2012-05-22 Arabidopsis thaliana
Arabidopsis thaliana		 174,652
(43,663 x 4) 		4 by_platform
by_series
5483 Gene expression in wild type and Cagal102 knockout Candida albicans strains. (GSE20883) [Oligo Array] Genotypic Candida albicans 15.7K (GPL10177) Genotypic Technology 2010-03-15 Candida albicans
Candida albicans		 47,232
(15,744 x 3) 		3 by_platform
by_series
5484 A role for Snf2 related nucleosome spacing enzymes in genome-wide nucleosome organization (GSE31833) [Oligo Array] Agilent Gene Expression Saccharomyces cerevisiae 8x15k array AMADID: 016333 (GPL14009) Genotypic Technology 2011-09-01 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 47,232
(15,744 x 3) 		3 by_platform
by_series
5485 Expression analysis with Phospholipase C over expression (GSE35745) [Oligo Array] Agilent-016333 Saccharomyces cerevisiae 8x15k Expression Array AMADID: 016333 (Probe based) (GPL15198) Genotypic Technology 2012-02-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 25,024
(6,256 x 4) 		4 by_platform
by_series
5486 Catabolite repression of phosphoenolpyruvate carboxykinase by a zinc finger protein under biotin- and pyruvate carboxylase-deficient conditions in Pichia pastoris (GSE32948) [Oligo Array] Agilent-025088 Pichia pastoris Gene Expression 8x15k array (GPL14714) Genotypic Technology 2011-10-13 Pichia pastoris
Pichia pastoris		 20,596
(5,149 x 4) 		4 by_platform
by_series
5487 TFIIH mutants treated with methyl methanesulfonate (GSE2343) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Genomics Institute of the Novartis Research Foundation 2005-02-25 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 112,020
(9,335 x 12) 		12 by_platform
by_series
5488 Udt1-1 anther and Wild type_anther (GSE2619) [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) Genomics and Genetics Institute, GreenGene Biotech 2005-05-04 Oryza sativa
Oryza sativa		 667,997
(60,727 x 11) 		3 8 by_platform
by_series
5489 A transcript profile of Medicago truncatula root meristem cells (GSE8115) [GeneChip] [Medicago] Affymetrix Medicago Genome Array (GPL4652) Genomic Interactions Group 2007-06-13 Medicago truncatula
Medicago truncatula		 367,668
(61,278 x 6) 		3 3 by_platform
by_series
5490 A transcript profile of Medicago truncatula 2HA and Jemmalong during somatic embryogenesis (GSE8131) [GeneChip] [Medicago] Affymetrix Medicago Genome Array (GPL4652) Genomic Interactions Group 2007-06-14 Medicago truncatula
Medicago truncatula		 367,668
(61,278 x 6) 		6 by_platform
by_series
5491 A transcript profile of Medicago truncatula 2HA tissue culture with auxin treatment (GSE8138) [GeneChip] [Medicago] Affymetrix Medicago Genome Array (GPL4652) Genomic Interactions Group 2007-06-15 Medicago truncatula
Medicago truncatula		 367,668
(61,278 x 6) 		6 by_platform
by_series
5492 Atf1-mediated active gene response to H2O2 challenge. (GSE13053) [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) Genome Institute of Singapore 2008-10-06 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 3,052,192
(381,524 x 8) 		8 by_platform
by_series
5493 Deconvolution of ChIP-chip MBF occupancies reveals the temporal recruitment of Rep2 at the MBF-target genes (GSE9912) [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) Genome Institute of Singapore 2007-12-17 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 2,670,668
(381,524 x 7) 		7 by_platform
by_series
5494 Cell Cycle-specific Expressions Are Modulated by Replication Checkpoint Kinases Rad3 and Cds1 in Fission Yeast (GSE4284) [Oligo Array] S. pombe 10K long oligonucleotide array (GPL1932) Genome Institute of Singapore 2006-02-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 1,557,564
(9,858 x 158) 		158 by_platform
by_series
5495 Time course expression data in wild-type and TF-deletion yeast (GSE25582) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Genome Institute of Singapore 2010-11-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 1,409,585
(9,335 x 151) 		151 by_platform
by_series
5496 HU treated cells vs wildtype untreated cells (elutriation centrifugation synchronized cells) (GSE4283) [Oligo Array] S. pombe 10K long oligonucleotide array (GPL1932) Genome Institute of Singapore 2006-02-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 867,504
(9,858 x 88) 		88 by_platform
by_series
5497 HU treated cells vs wildtype untreated cells (asynchronized cells) (GSE4280) [Oligo Array] S. pombe 10K long oligonucleotide array (GPL1932) Genome Institute of Singapore 2006-02-20 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 690,060
(9,858 x 70) 		70 by_platform
by_series
5498 Genome-wide Profiling of DNA Replication Timing in pombe. (GSE6977) [Oligo Array] S. pombe 10K long oligonucleotide array (GPL1932) Genome Institute of Singapore 2007-02-07 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 690,060
(9,858 x 70) 		70 by_platform
by_series
5499 Atf1-mediated active gene response to H2O2 challenge. (GSE13053) [Oligo Array] S. pombe 10K long oligonucleotide array (GPL1932) Genome Institute of Singapore 2008-10-06 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 443,610
(9,858 x 45) 		45 by_platform
by_series
5500 Altered genes expression profile of Rep2 mutants in Fission Yeast upon HU treatment. (GSE10901) [Oligo Array] S. pombe 10K long oligonucleotide array (GPL1932) Genome Institute of Singapore 2008-03-20 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 394,320
(9,858 x 40) 		40 by_platform
by_series
[1]      «      273   |   274   |   275   |   276   |   277      »      [324]
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