Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(47)		   GeneChip
(1,712)		   Tiling Array
(694)		   cDNA Array
(1,562)		   Oligo Array
(1,630)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(777)		   Other
(18)		   All
(6,479)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
5541 Yeast replication in the presence of MMS: WT and isw2 nhp10 strains (GSE9122) [cDNA Array] FHCRC Yeast Amplicon v1.1 (GPL1914) Fred Hutchinson CRC 2007-09-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 120,384
(6,336 x 19) 		19 by_platform
by_series
5542 Genetic complexity in yeast transcripts (GSE1990) [cDNA Array] FH_yeast_cDNA (GPL118) Fred Hutchinson Cancer Research Institute 2004-11-19 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 1,856,270
(7,085 x 262) 		262 by_platform
by_series
5543 BYxwild_40 (GSE37) [cDNA Array] FH_yeast_cDNA (GPL118) Fred Hutchinson Cancer Research Institute 2002-04-26 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 566,800
(7,085 x 80) 		80 by_platform
by_series
5544 BY_wild_parents (GSE38) [cDNA Array] FH_yeast_cDNA (GPL118) Fred Hutchinson Cancer Research Institute 2002-04-26 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 162,955
(7,085 x 23) 		23 by_platform
by_series
5545 Increase in chromatin accessibility to MNase at sites of DNA replication (GSE43548) [Oligo Array] NimbleGen Saccharomyces cerevisiae 2007-09-04_SGD1_TT_ChIP (GPL10725) Fred Hutchinson Cancer Research Center 2013-01-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 36,960,192
(385,002 x 96) 		96 by_platform
by_series
5546 INTACT method for gene expression and chromatin profiling of individual cell types within a tissue (GSE19654) [Oligo Array] Nimblegen_HD2_Arabidopsis (GPL7143) Fred Hutchinson Cancer Research Center 2009-12-24 Arabidopsis thaliana
Arabidopsis thaliana		 32,026,960
(2,001,685 x 16) 		12 4 by_platform
by_series
5547 Isw2 and Ume6 ChIP-chip in transcription factor deletion (Δume6, Δnrg1, Δcin5, and Δsok2) and DNA-looping deficient (sua7-1) cells (GSE39542) [Tiling Array] NimbleGen Saccharomyces cerevisiae 730K 090319_Scer_KH_CGH (GPL15833) Fred Hutchinson Cancer Research Center 2012-07-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 16,168,540
(702,980 x 23) 		23 by_platform
by_series
5548 Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks (GSE12212) [Tiling Array] FHCRC Arabidopsis Tiling Array (GPL3371) Fred Hutchinson Cancer Research Center 2008-07-23 Arabidopsis thaliana
Arabidopsis thaliana		 8,211,315
(391,015 x 21) 		4 17 by_platform
by_series
5549 Determination of ncRNAs repressed by Isw2 (GSE23108) [Oligo Array] NimbleGen Saccharomyces cerevisiae 2007-09-04_SGD1_TT_ChIP (GPL10725) Fred Hutchinson Cancer Research Center 2010-07-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 8,085,042
(385,002 x 21) 		21 by_platform
by_series
5550 Interdependence between DNA methylation and transcription (GSE5974) [Tiling Array] FHCRC Arabidopsis Tiling Array (GPL3371) Fred Hutchinson Cancer Research Center 2006-10-05 Arabidopsis thaliana
Arabidopsis thaliana		 1,955,075
(391,015 x 5) 		1 4 by_platform
by_series
5551 Trans-acting regulatory variation in Saccharomyces cerevisiae (GSE617) [cDNA Array] FH_yeast_cDNA (GPL118) Fred Hutchinson Cancer Research Center 2003-09-02 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 1,275,300
(7,085 x 180) 		180 by_platform
by_series
5552 Extensive demethylation of repetitive elements during seed development underlies gene imprinting (GSE14570) [Tiling Array] FHCRC Arabidopsis Tiling Array (GPL3371) Fred Hutchinson Cancer Research Center 2009-01-26 Arabidopsis thaliana
Arabidopsis thaliana		 1,173,045
(391,015 x 3) 		1 2 by_platform
by_series
5553 Chromatin and siRNA pathways cooperate to maintain DNA methylation (GSE3109) [Oligo Array] FHCRC Arabidopsis Oligo Array v1.0 (GPL1911) Fred Hutchinson cancer research center 2005-08-10 Arabidopsis thaliana
Arabidopsis thaliana		 794,220
(26,474 x 30) 		30 by_platform
by_series
5554 DNA demethylation in the Arabidopsis genome (GSE7336) [Tiling Array] FHCRC Arabidopsis Tiling Array (GPL3371) Fred Hutchinson Cancer Research Center 2007-03-22 Arabidopsis thaliana
Arabidopsis thaliana		 782,030
(391,015 x 2) 		2 by_platform
by_series
5555 Protein Determinants of Meiotic DNA Break Hotspots (dataset 2) (GSE43121) [Oligo Array] Agilent-025249 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version) (GPL16421) Fred Hutchinson Cancer Research Center 2012-12-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 701,312
(43,832 x 16) 		16 by_platform
by_series
5556 Protein Determinants of Meiotic DNA Break Hotspots (GSE43122) [Oligo Array] Agilent-025249 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version) (GPL16421) Fred Hutchinson Cancer Research Center 2012-12-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 701,312
(43,832 x 16) 		16 by_platform
by_series
5557 Protein Determinants of Meiotic DNA Break Hotspots (dataset 1) (GSE43118) [Oligo Array] Agilent-015424 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version - A_86_Pnnnn probes) (GPL16383) Fred Hutchinson Cancer Research Center 2012-12-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 213,535
(42,707 x 5) 		5 by_platform
by_series
5558 Protein Determinants of Meiotic DNA Break Hotspots (GSE43122) [Oligo Array] Agilent-015424 S. pombe Whole Genome ChIP-on-Chip Microarray 4x44K (Probe Name version - A_86_Pnnnn probes) (GPL16383) Fred Hutchinson Cancer Research Center 2012-12-21 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 213,535
(42,707 x 5) 		5 by_platform
by_series
5559 DOT4/dot4-1 and DOT4/dot4-5 transcript arrays (GSE2330) [cDNA Array] DOT4/UBP10 platform (GPL1879) Fred Hutchinson Cancer Research Center 2005-02-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 149,184
(6,216 x 24) 		24 by_platform
by_series
5560 DOT4/dot4 null, UBP8/ubp8 null transcript arrays (GSE2329) [cDNA Array] DOT4/UBP10 platform (GPL1879) Fred Hutchinson Cancer Research Center 2005-02-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 111,888
(6,216 x 18) 		18 by_platform
by_series
[1]      «      276   |   277   |   278   |   279   |   280      »      [324]
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