Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)
  Primates
(5,069)
  Rodents
(189,292)
  Mammals
(16,929)
  Vertebrates
(18,759)
  Invertebrates
(38,793)
  Plants
(93,301)
  Bacteria
(39,613)
  Viruses
(1,263)
  Phages
(101)
  Unclassified
(5,497)
  All
(931,947)
 
  SAGE NlaIII
(88)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(298)
  GeneChip
(27,654)
  Tiling Array
(5,201)
  cDNA Array
(24,041)
  Oligo Array
(30,982)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(4,835)
  Other
(117)
  All
(93,301)
 
  brain
(306)
  blood
(1,156)
  connective
(201)
  reproductive
(456)
  muscular
(16)
  digestive
(44)
  liver
(0)
  lung
(76)
  urinary
(43)
  endo/exo-crine
(101)
  embryo
(135)
  adult aerial structure
(12,240)
  young aerial structure
(8,419)
  root
(4,862)
  meristem/growing tissue
(2,307)
  flower/sexual organ
(3,159)
  seed/fruit/grain
(3,159)
  pooled
(6,762)
  unclassified
(49,859)
  all
(93,301)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
81 GSM759571 [E-MTAB-552] Mature Tuber 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Solanum tuberosum) (GPL13898) SRA Solanum tuberosum
Solanum tuberosum
root Mature Tuber
82 GSM759565 [E-MTAB-552] Leaf 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Solanum tuberosum) (GPL13898) SRA Solanum tuberosum
Solanum tuberosum
leaf Leaf
83 GSM759564 [E-MTAB-552] Flower 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Solanum tuberosum) (GPL13898) SRA Solanum tuberosum
Solanum tuberosum
other flower/sexual organ Flower
84 GSM759444 [E-MTAB-444] Y3 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) SRA Cleome gynandra
Cleome gynandra
leaf young leaf
85 GSM759445 [E-MTAB-444] Y2 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) SRA Cleome gynandra
Cleome gynandra
leaf young leaf
86 GSM759446 [E-MTAB-444] Y1 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) SRA Cleome gynandra
Cleome gynandra
leaf young leaf
87 GSM759442 [E-MTAB-444] O3 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) SRA Cleome gynandra
Cleome gynandra
leaf mature leaf
88 GSM759443 [E-MTAB-444] O2 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) SRA Cleome gynandra
Cleome gynandra
leaf mature leaf
89 GSM759447 [E-MTAB-444] O1 0 European Bioinformatics Institute 2011-07-12 [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) SRA Cleome gynandra
Cleome gynandra
leaf mature leaf
90 GSM1023981 [C. albicans-WT]-[from Ileum]-[Rep7] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
91 GSM1023980 [C. albicans-WT]-[from Ileum]-[Rep6] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
92 GSM1023979 [C. albicans-WT]-[from Ileum]-[Rep5] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
93 GSM1023978 [C. albicans-WT]-[from Ileum]-[Rep4] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
94 GSM1023977 [C. albicans-WT]-[from Ileum]-[Rep3] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
95 GSM1023976 [C. albicans-WT]-[from Ileum]-[Rep2] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
96 GSM1023975 [C. albicans-WT]-[from Ileum]-[Rep1] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
intestine WT C. albicans cells from murine ileum Reference
97 GSM1023961 [C. albicans-WT]-[from Cecum]-[Rep6] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
colon WT C. albicans cells from murine Cecum Reference
98 GSM1023960 [C. albicans-WT]-[from Cecum]-[Rep5] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
colon WT C. albicans cells from murine Cecum Reference
99 GSM1023959 [C. albicans-WT]-[from Cecum]-[Rep4] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
colon WT C. albicans cells from murine Cecum Reference
100 GSM1023958 [C. albicans-WT]-[from Cecum]-[Rep3] 6,456 Tufts University 2012-10-23 [Oligo Array] NRC-BRI C. albicans expression microarray V2.0 (GPL9818) RNA Candida albicans
Candida albicans
colon WT C. albicans cells from murine Cecum Reference
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