Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(89,973)
  Tiling Array
(2,000)
  cDNA Array
(11,116)
  Oligo Array
(53,181)
  Bead Array
(13,914)
  Protein Array
(0)
  Antibody
(22)
  RT-PCR
(885)
  HT-Seq
(8,762)
  Other
(395)
  All
(181,106)
 
  brain
(2,593)
  blood
(1,362)
  connective
(883)
  reproductive
(537)
  muscular
(1,217)
  digestive
(277)
  liver
(1,251)
  lung
(707)
  urinary
(319)
  endo/exo-crine
(257)
  embryo
(644)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(552)
  unclassified
(3,315)
  all
(13,914)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
41 GSM691163 GF, rep3 15,154 UNIVERSITY OF NORTH CAROLINA CHAPEL HILL 2011-03-14 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (gene version 2) (GPL11017) RNA Mus musculus
Mus musculus
testis Isolated colonocytes, germfree
42 GSM691164 GF, rep4 15,154 UNIVERSITY OF NORTH CAROLINA CHAPEL HILL 2011-03-14 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (gene version 2) (GPL11017) RNA Mus musculus
Mus musculus
testis Isolated colonocytes, germfree
43 GSM691165 GF, rep5 15,154 UNIVERSITY OF NORTH CAROLINA CHAPEL HILL 2011-03-14 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (gene version 2) (GPL11017) RNA Mus musculus
Mus musculus
testis Isolated colonocytes, germfree
44 GSM691166 GF, rep6 15,154 UNIVERSITY OF NORTH CAROLINA CHAPEL HILL 2011-03-14 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (gene version 2) (GPL11017) RNA Mus musculus
Mus musculus
testis Isolated colonocytes, germfree
45 GSM1052767 Control rep 1 25,697 University of Newcastle Australia 2012-12-12 [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) RNA Mus musculus
Mus musculus
ovary Adult ovary from room air exposed mouse
46 GSM1052768 Control rep 2 25,697 University of Newcastle Australia 2012-12-12 [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) RNA Mus musculus
Mus musculus
ovary Adult ovary from room air exposed mouse
47 GSM1052769 Control rep 3 25,697 University of Newcastle Australia 2012-12-12 [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) RNA Mus musculus
Mus musculus
ovary Adult ovary from room air exposed mouse
48 GSM1052770 Smoke rep 1 25,697 University of Newcastle Australia 2012-12-12 [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) RNA Mus musculus
Mus musculus
ovary Adult ovary from cigarette smoke exposed mouse
49 GSM1052771 Smoke rep 2 25,697 University of Newcastle Australia 2012-12-12 [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) RNA Mus musculus
Mus musculus
ovary Adult ovary from cigarette smoke exposed mouse
50 GSM1052772 Smoke rep 3 25,697 University of Newcastle Australia 2012-12-12 [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) RNA Mus musculus
Mus musculus
ovary Adult ovary from cigarette smoke exposed mouse
51 GSM896953 Spg1 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis day 7-9 Spermatogonia
52 GSM896954 Spg2 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis day 7-9 Spermatogonia
53 GSM896955 Spg3 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis day 7-9 Spermatogonia
54 GSM896956 RS1 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis adult round spermatids
55 GSM896957 RS2 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis adult round spermatids
56 GSM896958 RS3 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis adult round spermatids
57 GSM896959 PS1 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis adult pachytene spermatocytes
58 GSM896960 PS2 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis adult pachytene spermatocytes
59 GSM896961 PS3 611 University of Newcastle 2012-03-16 [Bead Array] Illumina Mouse v2 MicroRNA expression beadchip (GPL8181) RNA Mus musculus
Mus musculus
testis adult pachytene spermatocytes
60 GSM260210 expt 19 CONTROL 1H 23,189 University of Missouri 2008-01-28 [Bead Array] University of Missouri Illumina mouseRef-8 23K (GPL6428) RNA Mus musculus
Mus musculus
placenta primary trophoblast cells treated for 1 hour on serum-free medium
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