Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,864)
  Tiling Array
(48)
  cDNA Array
(80)
  Oligo Array
(4,122)
  Bead Array
(598)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(19)
  HT-Seq
(85)
  Other
(9)
  All
(7,826)
 
  brain
(385)
  blood
(427)
  connective
(148)
  reproductive
(61)
  muscular
(121)
  digestive
(158)
  liver
(629)
  lung
(100)
  urinary
(151)
  endo/exo-crine
(258)
  embryo
(28)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(156)
  unclassified
(242)
  all
(2,864)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
41 GSM399065 WT brain (cerebellum) microvascular fragments, 2 months old, biological rep 1 45,101 Karolinska Institutet 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
cerebrum Mouse brain
42 GSM417401 WT biological replicate 3 45,101 McGill University 2009-06-15 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
kidney WT kidneys
43 GSM417400 WT biological replicate 2 45,101 McGill University 2009-06-15 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
kidney WT kidneys
44 GSM417399 WT biological replicate 1 45,101 McGill University 2009-06-15 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
kidney WT kidneys
45 GSM423695 Wnt1_6 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1 mouse
46 GSM423694 Wnt1_5 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1 mouse
47 GSM423693 Wnt1_4 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1 mouse
48 GSM423692 Wnt1_2 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1 mouse
49 GSM423691 Wnt1_1 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1 mouse
50 GSM423703 Wnt1/C2mE_5 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1/C2mE mouse
51 GSM423702 Wnt1/C2mE_4 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1/C2mE mouse
52 GSM423701 Wnt1/C2mE_3 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1/C2mE mouse
53 GSM423700 Wnt1/C2mE_2 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1/C2mE mouse
54 GSM423699 Wnt1/C2mE_1 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of K19-Wnt1/C2mE mouse
55 GSM398238 Wildtype-mouse-liver-TCDD-rep6 16,395 Ontario Institute for Cancer Research 2009-04-27 [GeneChip] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1] (GPL8492) RNA Mus musculus
Mus musculus
liver/hepato Wildtype mouse liver, TCDD treated, 19 hours
56 GSM398237 Wildtype-mouse-liver-TCDD-rep5 16,395 Ontario Institute for Cancer Research 2009-04-27 [GeneChip] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1] (GPL8492) RNA Mus musculus
Mus musculus
liver/hepato Wildtype mouse liver, TCDD treated, 19 hours
57 GSM398235 Wildtype-mouse-liver-TCDD-rep4 16,395 Ontario Institute for Cancer Research 2009-04-27 [GeneChip] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1] (GPL8492) RNA Mus musculus
Mus musculus
liver/hepato Wildtype mouse liver, TCDD treated, 19 hours
58 GSM398234 Wildtype-mouse-liver-TCDD-rep3 16,395 Ontario Institute for Cancer Research 2009-04-27 [GeneChip] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1] (GPL8492) RNA Mus musculus
Mus musculus
liver/hepato Wildtype mouse liver, TCDD treated, 19 hours
59 GSM398228 Wildtype-mouse-liver-TCDD-rep2 16,395 Ontario Institute for Cancer Research 2009-04-27 [GeneChip] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1] (GPL8492) RNA Mus musculus
Mus musculus
liver/hepato Wildtype mouse liver, TCDD treated, 19 hours
60 GSM398227 Wildtype-mouse-liver-TCDD-rep1 16,395 Ontario Institute for Cancer Research 2009-04-27 [GeneChip] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1] (GPL8492) RNA Mus musculus
Mus musculus
liver/hepato Wildtype mouse liver, TCDD treated, 19 hours
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